| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1320 |
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| Symbol | |
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| ID | 4847601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1304482 |
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| End bp | 1306410 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640116011 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001047232 |
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| Protein GI | 126179267 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.223951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCAT TTCACCTTAA AGCGGATTTT AAGCCAACCG GCTCGCAGCC CGACGCGATC
CGGAAACTTA CCGACGGGCT TTCCCGCGGC GAGCAGTACC AGACCCTCCT CGGGGTCACG
GGGTCGGGGA AGACGTTTAC GATAGCAAAC GTCGTCGAGG AGGTCCAGAA GCCCACCCTC
GTCATAGCCC ACAACAAGAC GCTTGCCGCC CAGCTCTACA ACGAGTTCAG GTCGTTCTTC
CCCGATAACC GGGTGGAGTA CTTCGTCTCC TACTACGACT ACTACCAGCC TGAGTCCTAC
ATCGCGAAGC GCGACCTCTA CATCGAGAAA GACGCCCAGA TCAACCCCAA GATCGAGCAG
ATGCGGCTTG CGGCCACAGC ATCGCTTCTC TCCCGCCCGG ACACCATCAT CGTCGCCTCG
GTCTCCTGCA TCTACGGTCT CGGGAACCCC GAAAACTTCC AGGGGATGGG CTTTGAGATG
AAGGTCCGCG ACAGGATGCG GCGGGATGAT ATCATCAGGA GACTCGTCGA CATCCAGTTC
GAGCGAAACG ACATCGAGCT CATGCCGGGC CGGTTCCGCG TGAAGGGCGA CACCATCGAT
ATCGTCCCCG GCTACTTCAA CAACATCATC CGTATCGAAC TCTTCGGGGA CGAGATCGAC
CGGATCAGCG AGATCGACAA GACCTCGGGA GAGCGGCTGG AGGCGATGGA CTACTTCTTC
GTCTACCCGG CCAGGCACTT CGTCGCCCCC GAGGAGGAGA AGGAGCGGGC GATAGCCTCG
ATCGAGCAGG AACTCGAGGA GTGGCTCCCG AACCTCGATA TGCTCGAGGC GCATCGCCTC
CGCCAGCGGA CACTCTACGA CATCGATATG CTCCGCGAGA CCGGGACCTG CAAGGGGATC
GAGAACTACT CCCGCCACTT CGACGGGAGA AAAGCCGGCG AACAGCCTTA CTGCCTGCTT
GACTACTTCC CCGAGGACTT CCTGATGGTG ATCGACGAGA GCCACCAGAC CCTGCCCCAG
GTCAGGGGGA TGTACAACGG CGACTACTCG CGGAAGAAGT CCCTCGTGGA CTACGGCTTT
AGGCTCCCGT CGGCGTTCGA CAACCGGCCG CTGAAGTTCG AGGAGTTCTC GGGCTACATG
AAAAACGTCA TCTTCGTCTC GGCGACCCCC GGCGACTACG AACTGAAACG ATCGAGCGTC
GCGGAGCAGA TCATCCGGCC CACGGGGCTC GTCGACCCGG CAGTCGAGAT CCGGCCGATC
GAGGGGCAGA TCCCGGACGT GATGACGGAG ATCCGGGCCA CCATCGAACG CGGCGACCGC
ATACTGCTGA CGACCCTTAC AAAGCGGCTC GCCGAGGAAC TCTCGGAGTA TCTCGCCGAG
CAGGGGATCA AGACCCGCTA CCTCCATTCC GAGATCGACA CCATCGAGCG GACGGAGATC
ATCCGGCAGC TCCGTCTCGG GAAGTACGAC GTCCTCGTCG GGATCAACCT CCTGCGGGAG
GGGCTCGACA TCCCCGAGGT GGGGTTCGTC GGCATCCTCG ACGCCGACAA GGAAGGGTTC
CTCCGCGACG CGAGAAGCCT CGTCCAGACC ATCGGGCGGG CCGCCCGGAA CGTCAACGCG
AAGGTCGTGC TCTACGCCGA CACCATGACC GACTCGATCA AGAAAGCGAT GGCCGAGACC
GGGCGGCGGC GGGCGATGCA GCTCGACTAC AACGTCCGGC ACGGCATCAC GCCGCAGACG
ATCGTAAAAC CGATCCGCGA AAAAGAGGTC GATATCACCG ATATCAAACA CGTCCCGAAG
TCCGAAGTCC CGAACCTGAT CATCGAACTC GAGGCCGATA TGCGGGAGGC GGCGGAGCGC
CTGGAGTTCG AGCGGGCGAT TGCTCTGCGG GATATGATCA AGAGGCTGCA GGAAGGGAAA
GGGCGGTAG
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| Protein sequence | MTAFHLKADF KPTGSQPDAI RKLTDGLSRG EQYQTLLGVT GSGKTFTIAN VVEEVQKPTL
VIAHNKTLAA QLYNEFRSFF PDNRVEYFVS YYDYYQPESY IAKRDLYIEK DAQINPKIEQ
MRLAATASLL SRPDTIIVAS VSCIYGLGNP ENFQGMGFEM KVRDRMRRDD IIRRLVDIQF
ERNDIELMPG RFRVKGDTID IVPGYFNNII RIELFGDEID RISEIDKTSG ERLEAMDYFF
VYPARHFVAP EEEKERAIAS IEQELEEWLP NLDMLEAHRL RQRTLYDIDM LRETGTCKGI
ENYSRHFDGR KAGEQPYCLL DYFPEDFLMV IDESHQTLPQ VRGMYNGDYS RKKSLVDYGF
RLPSAFDNRP LKFEEFSGYM KNVIFVSATP GDYELKRSSV AEQIIRPTGL VDPAVEIRPI
EGQIPDVMTE IRATIERGDR ILLTTLTKRL AEELSEYLAE QGIKTRYLHS EIDTIERTEI
IRQLRLGKYD VLVGINLLRE GLDIPEVGFV GILDADKEGF LRDARSLVQT IGRAARNVNA
KVVLYADTMT DSIKKAMAET GRRRAMQLDY NVRHGITPQT IVKPIREKEV DITDIKHVPK
SEVPNLIIEL EADMREAAER LEFERAIALR DMIKRLQEGK GR
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