Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1318 |
Symbol | |
ID | 4848234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1302364 |
End bp | 1303623 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640116009 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001047230 |
Protein GI | 126179265 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.227704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGCC TGCACCTGAT CCTCCAGCGC TACTTCGGGC ATTCTGCGTT CAACCTCTAC CAGCGGGAGA TCATCGAAGA CCTTCTTGCC GGGCGCGACG TCCTCGCGGT GCTCGCGACC GGAGGGGGAA AATCACTCTG CTACCAGGTC CCCGCGCTCG TCGGCGACGG TGTCGTGCTG GTGATATCGC CGCTCATCGC CCTGATGAAG GACCAGGTCG ACGACCTGCA GGCCCGCGGG GTCGGCGCGG AAGCGCTGAA CTCTTCCGGA TCATATGCCG CGACGCGCCG GATCCTCTCG GAACTCAAAG AGGGGCTTAT CCAGATCCTC TACGTCTCGC CGGAGAAGGC GGTCGGCGAA GATTTTATCG ACCTGATGGC GTCCCTTCCG GTCACCCTGA TCGCGGTCGA CGAGGCGCAC TGCATATCGA TGTGGGGGCA CCAGTTCCGC CCGGAGTACC GGTCGCTTTC GGTGCTCAAG GAACGGTTCC CCGGGGTGCC GATGGTTGCC CTGACGGCGA CCGCGACCCC GGACGTCCGC GACGACATCG CGCGGCAGCT CAATCTTTCG GACCCTTCGG TCTACGTCGG GAGTTTCAAC CGCGAGAACC TCCGCTACGT CGTCGTCGGA AAGGAGGAGG ACGCGTACGA GCGGCTCCGG GCCTATCTGC GGGGCAGGAG AGGGGACGCC GGGATCGTCT ATGTCGCAAC CCGGGACGGG GCCGAGACGC TCGCGGCACG GCTCCGCGCC GGCGGGATTC CGGCACTCCC CTACCATGCA GGCATGACGG CGGCCGCCCG GAGAGAGACG CAGGACAGGT TCATCGGCGG GAAGGTTCCG GTCGTCTGCG CGACGAGCGC GTTCGGCATG GGGATCGACA AGCCGGACGT GCGGTTCGTC GTCCACTACG ACATGCCCAA GACCCTCGAG GCCTACTACC AGGAGAGCGG CCGGGCCGGA AGGGACGGCA AGGAGAGCGA CTGCATCCTC TACTACAGCG ACGAAGATGC GCGGCGCCTC AGATCGTTCA TCGACCGCGA TCTTGCGTCC GAATTCCAGC GCAAGGTCGC ACGCTCGAAA CTCCAGAGCA TGGTGGATTA CTGCACCACG ACGGAGTGCC GGAGAAAGGC GCTCCTCGGG TACTTCGGGG AGCGAATCGA GGAGCCCTGC AACGGCTGCG ACGCCTGTGC TCCGGCAGGA AAGGCTCGTC CCCGGTCCGG GCGCAGGAAA CGCGGTGCCA CCCGCCCGGC ATCCGGCTGA
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Protein sequence | MDRLHLILQR YFGHSAFNLY QREIIEDLLA GRDVLAVLAT GGGKSLCYQV PALVGDGVVL VISPLIALMK DQVDDLQARG VGAEALNSSG SYAATRRILS ELKEGLIQIL YVSPEKAVGE DFIDLMASLP VTLIAVDEAH CISMWGHQFR PEYRSLSVLK ERFPGVPMVA LTATATPDVR DDIARQLNLS DPSVYVGSFN RENLRYVVVG KEEDAYERLR AYLRGRRGDA GIVYVATRDG AETLAARLRA GGIPALPYHA GMTAAARRET QDRFIGGKVP VVCATSAFGM GIDKPDVRFV VHYDMPKTLE AYYQESGRAG RDGKESDCIL YYSDEDARRL RSFIDRDLAS EFQRKVARSK LQSMVDYCTT TECRRKALLG YFGERIEEPC NGCDACAPAG KARPRSGRRK RGATRPASG
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