| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1314 |
|---|
| Symbol | |
|---|
| ID | 4846734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1298086 |
|---|
| End bp | 1299405 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640116005 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001047226 |
|---|
| Protein GI | 126179261 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0274508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCTG CCACCGATAT TGCGATCATC GTCCTCCTGA TACTCGCAAA CGGCTTCTTT
TCGATGGCGG AGTTCGCGCT CGTCTCTGCA AGAACGGCAC GCCTGCAGAA AAGAGCGGCG
GGCGGCGACG CCGGGGCGGC GACCGCCCTC GAACTTGCAC AGGATCCGAC GCAGTTCCTC
TCCACCATCC AGATCGGCAT CACCCTCGTC GGGATCCTGG CCGGAGCCTT CGGCGGGGCG
ACGCTCGCGG GACCTCTTGC AGAAGAGTTT GCCCGATTTC CCTTGGTCGC GCCTTACAGC
GGCACGCTCG CGGTCGTAAC CGTCGTCGCC GTCATCACCT ACTTAACGCT CGTCGTCGGG
GAACTGGTGC CGAAACGGGT GGCCATGACC CACGCCGACC GGATTGCATC GCTGGTCTCG
CGCCCGGTAC GGCTCCTCTC GCTGATCGCT GCACCGCTCG TCCGGCTGCT GAGCGCCTCG
ACCGAGGGGG TCCTCATGCT GCTCAGGGTT CGGAAACCTT CGGAGCCCGA GGTTACGGAG
GAGGACGTCA GGGTTCTCAT CGGGCAGGCC ACCCGGGCCG GCGTCTTCGA GGAGGCGGAA
CAGGATATGG TGGAGAGTAT CTTCCGCCTC GCCGACCGGC GGGTCAGCGT GCTGATGACC
CCGCGGCCCG ACATCGTGGC CGTGGACGTC GAGGACCCCG TCGAAGAGAA CTGGCAAAAG
ATGGTGGATT CCGGGCATGT CTATTTCCCG GTCTACCGCG ACCATCTCGA CAACCTGCTC
GGCACCGTCT CGGTCCGCAG CCTCTGGGCG CGGATGATCG CGGGCGAATC CCCTGACCTG
TCGAATGCCA TCGATCCCGC CTTCTTCGTG CCCGAGAGCG TCCCGGCACT CTCGGTTCTC
GACGAGTTCA AGACTTCCGG GGCGCGGATC GCCCTCGTCA CCGACGAGTA CGGGAGTATC
CAGGGGCTGG TTACCATCCA CGATATCATG GAGTCGATCG TCGGCGGCAT CCCGTCGCCC
GAGCACCCGC CAGAGGGTCC GGCGGTCCTT CGTCCGGACG GGTCGTGGCT CCTCGACGGG
ATGCTCCCGG TCGACGAGTT CCACGACCTC CTCGATGTGG CGGCTACCCT GCCCGGAGAG
GGGCGCGGCT ACTACCAGAC GCTCGGCGGG TTCGTGATGA TGTATCTCGA ACGGACGCCG
GAGGCCGGCG ACCGGTTCGC CTGGAACGGA TTCCGGTTCG AGGTGCTCGA TATGGACGGC
CACCGGGTCG ATAAGGTGCT CGTCACGCCG GCGGGGGCCG GGAAGGAGAA GAATGGGTGA
|
|---|
| Protein sequence | MPPATDIAII VLLILANGFF SMAEFALVSA RTARLQKRAA GGDAGAATAL ELAQDPTQFL
STIQIGITLV GILAGAFGGA TLAGPLAEEF ARFPLVAPYS GTLAVVTVVA VITYLTLVVG
ELVPKRVAMT HADRIASLVS RPVRLLSLIA APLVRLLSAS TEGVLMLLRV RKPSEPEVTE
EDVRVLIGQA TRAGVFEEAE QDMVESIFRL ADRRVSVLMT PRPDIVAVDV EDPVEENWQK
MVDSGHVYFP VYRDHLDNLL GTVSVRSLWA RMIAGESPDL SNAIDPAFFV PESVPALSVL
DEFKTSGARI ALVTDEYGSI QGLVTIHDIM ESIVGGIPSP EHPPEGPAVL RPDGSWLLDG
MLPVDEFHDL LDVAATLPGE GRGYYQTLGG FVMMYLERTP EAGDRFAWNG FRFEVLDMDG
HRVDKVLVTP AGAGKEKNG
|
|---|
| |