| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1305 |
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| Symbol | |
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| ID | 4847412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1287932 |
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| End bp | 1289170 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640115996 |
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| Product | proteasome-activating nucleotidase |
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| Protein accession | YP_001047217 |
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| Protein GI | 126179252 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGATA TCGCTCGGCA GGCACCAGAC AAGGATACCG GTGAAGACAT CTACCAGTAC
CTCCTGGAAC GGATTACGAA CCTCGAAAAC CGAAACCTGG AGCTACGCGA GCAGTTCCGC
CAGATGGAGT CCGAGAAACG ATACGTTGAG ACCCAGAAGA TCCGCTACGA ACGGGAACTC
CGAAAACTCA AGAGCGAGAT CGAACAGCTG AGAAGCCCTC CTCTCGTGAT CGGAACCGTT
ACCGACGTTA TCGACAACAG CCGGGTGATC GTGCGAAGCA GTGCAGGACC GCGATTCCTG
GTCCGTACGT CCCAGCTTAT CGACCCCGAT CTCCTCAAAC CGGGTGTGCG GTGTACGCTC
AACCAGCAGT CCCTCGCGAT CGTGGATGTG CTCCCCACGA GCTACGACGC GCAGATCTAC
GGTATGGAGC TGGTGGAGTC CCCGGAGGAG ACCTACGAGA ACATCGGCGG CCTTGAACCG
CAGATCGAGG AGATCCGGGA AGCCGTCGAG CTCCCCCTGA CAAAACCGCA GCTCTTCGAG
AAGGTCGGCA TCTCCCCGCC GAAGGGCGTT CTCCTCTACG GCCCGCCCGG CACGGGGAAG
ACCCTCCTCG CGCGGGCGGT GGCCCACCAG ACGAACGCGC ATTTCCTCCG CGTGGTCGGT
TCGGAGCTGG TGCAGAAGTA CATCGGCGAG GGCGCCCGCC TGGTCCGGGA GCTCTTCGAC
CTCGCGAAGC AGAGGGCGCC GTCGATCATC TTCATCGACG AGATCGACGC AATCGGCGCG
CACCGGAACG ACTCGACCAC CTCCGGCGAC CGCGAGGTCC AGCGGACGCT GATGCAGCTC
CTGGCGGAGA TGGACGGGTT CGACAACCGC GGGGACGTCA AGATCGTCGC GGCGACCAAC
CGGATCGATA TCCTCGATCG TGCCCTCCTC CGCCCGGGCC GGTTCGATCG GATGATTGAG
ATCCCGCTCC CCGACCACCA GGGGAGGCTT GCGATCTTAA AGATCCACAC CCAGTACATG
AACATCGGCG AAGACGTCAA CCTCTCGGAG GTCTCGCGGC TCACGGAAGG CAAGAACGGT
GCCGACCTCC GGGCGATATG CATGGAGGCG GGGATGTTCG CCATCAGGAT GGAGCGCGAT
GCGGTCAACA GCGAAGATTT CATGAAGGCG ATCGACAAAC TCGCGCTTGA CTTCGATCGC
CACCACTTCC ACACCACCTT CGGCGAGATG TTCGCCTGA
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| Protein sequence | MGDIARQAPD KDTGEDIYQY LLERITNLEN RNLELREQFR QMESEKRYVE TQKIRYEREL
RKLKSEIEQL RSPPLVIGTV TDVIDNSRVI VRSSAGPRFL VRTSQLIDPD LLKPGVRCTL
NQQSLAIVDV LPTSYDAQIY GMELVESPEE TYENIGGLEP QIEEIREAVE LPLTKPQLFE
KVGISPPKGV LLYGPPGTGK TLLARAVAHQ TNAHFLRVVG SELVQKYIGE GARLVRELFD
LAKQRAPSII FIDEIDAIGA HRNDSTTSGD REVQRTLMQL LAEMDGFDNR GDVKIVAATN
RIDILDRALL RPGRFDRMIE IPLPDHQGRL AILKIHTQYM NIGEDVNLSE VSRLTEGKNG
ADLRAICMEA GMFAIRMERD AVNSEDFMKA IDKLALDFDR HHFHTTFGEM FA
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