| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1298 |
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| Symbol | |
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| ID | 4847583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1281621 |
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| End bp | 1282889 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640115989 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001047210 |
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| Protein GI | 126179245 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.873683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGTCC GCGTCTCGCA GACCGGCCCG GTCGACGCGG CGTTTCCGGC GCCGCCCTCC
AAGAGTTACA CCCACCGGGC GCTGATCGCG GGAGCGCTCG CCTTGGGAAG AACGCGAATC
GCACGGCCGC TCCGGGCGGC CGATACAGAA CTGACCGCCC GGGGGCTCGA AGCCCTCGGG
GTGCCGCTCG AGTGGCTGCC GGGGGAGATC GCCGTCGCCG GCTGCAGCGG CACCTTCCCG
GCGGCGGGAG AGGTCACCAT CGACTGCGGG AACTCCGGGA CGACGCTGCG GCTCCTCACC
TCGGCGGCGC TCCTCTCGCA GCACCCGGTG GTGCTGACGG GGAGCCCACG GATGCTCGAG
CGGCCGGTCG GCCCCCTTGC GGGGGCGCTC CGGGCCCTCG GGGGTGACGT CGCGTTCACC
GGTCAGCCCG GCTACCCGCC CATCCGCATC TCCGGGAGAC TCCGGGGCGG GAGGGCGACG
ATCGACGGAA GCATCAGCAG CCAGTTCGTC TCGTCCATCC TGATGGCGGC GCCCTACGCA
GAGGAGGACG TGGAACTCAC GCTCCCGGCG ACCCCGGCCT CGCGGTCGTA TCTCGACGTG
ACCGCGGACG TGATGCTCCG GTTCGGTGCG CATATCGAGC GGCAGGGCTA CGACCGGTTC
CGGGTGGAGA GCGGTAGAGC CTACCGGGGG AGGGATTACC GGGTCGAGGG CGACTACTCC
TCGGCCTCCT ATCTCTTCGC GGTCGCGGCC GTCTGCGGCG GGAGGGTCGC GGTCACGGGC
CTGAACCCGA CTTCCGTCCA GGGCGACCGC CGGTTCCTCG ACGCCCTCGA GGCGATGGGG
TGCAGCGTCG CCGCCGGCAC CGACGCAGTG ACGGTGGAGC GGACGGGCGA TCTCAAAGGC
ATCGAGATCG ATATGTCCTC GTCCCCCGAC ACCGTCCAGA CGCTCGCGGC GGTGGCGGCG
ACGGCAGGGT CGCCAACGAC GATCACCGGG ACGGCGCACC TGCAGTACAA GGAGAGCGAC
CGCGTCGGGG TGACGGCGGA CACCCTCCGG CGGATGGGTG CGGGGGTCGA GGTCACGGAG
GATTCCCTCA CGATCACGCC CGCGCCCCTC CACGGGGTGG CCGTCGACCC GCACGACGAC
CACCGGACGG CGATGGCGTT TGCCGTGCTC GGGCTCGCGG TCGGGGGGAT GGCGATCCGT
GACCCCGAAT GCGTGGAGAA GTCGTTCCCC GGGTTCTGGG AGGCGCTCTA CGGGGAGGGG
CTGCTGTGA
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| Protein sequence | MIVRVSQTGP VDAAFPAPPS KSYTHRALIA GALALGRTRI ARPLRAADTE LTARGLEALG
VPLEWLPGEI AVAGCSGTFP AAGEVTIDCG NSGTTLRLLT SAALLSQHPV VLTGSPRMLE
RPVGPLAGAL RALGGDVAFT GQPGYPPIRI SGRLRGGRAT IDGSISSQFV SSILMAAPYA
EEDVELTLPA TPASRSYLDV TADVMLRFGA HIERQGYDRF RVESGRAYRG RDYRVEGDYS
SASYLFAVAA VCGGRVAVTG LNPTSVQGDR RFLDALEAMG CSVAAGTDAV TVERTGDLKG
IEIDMSSSPD TVQTLAAVAA TAGSPTTITG TAHLQYKESD RVGVTADTLR RMGAGVEVTE
DSLTITPAPL HGVAVDPHDD HRTAMAFAVL GLAVGGMAIR DPECVEKSFP GFWEALYGEG
LL
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