Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1293 |
Symbol | |
ID | 4848230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1274570 |
End bp | 1277089 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640115984 |
Product | peptidase U32 |
Protein accession | YP_001047205 |
Protein GI | 126179240 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.461857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCACG ATCACCATAA GACGTCCGGG TCGCCGGAAC TGCTTGCGCC GGCCGGGTCG CCGGAGGCCC TGGCCGCAGC GGTTGCCGCC GGCGCCGATG CCGTCTACCT TGCCGGGCGA CGGTTCGGGG CCAGGCACTA CGCGGCGAAC TTCTCCGACG AGGAACTCGA ATCCGCCGTC GGTTACGCGC ACCTCCATGG AGTCAGGGTT TACGTCACCG TAAACGTCCT CGTCCGGGAC GCCGAACTCC CCGACGTCGC CCGCTACCTC CTCCGGCTCT ACGAGCTCGG GGTCGATGCC GTTCTGGTGC AGGATATCGG TGTGGCGGCG CTTGCCCGGG AGGTCGTCCC GGACCTCATA CTCCACGCCT CGACCCAGAT GACGATCCAC AACCGCGAAG GCGTGGTGCG GGCGGCACGG GAGGGGTTCT CCCGCGTGGT GCTCGCCCGG GAACTCACGC TGTCCGAGAT CGAGGGTATC GCAGAGGATG CGGAGGCACG GGGGATCGGC ATCGAGGTCT TCGCCCACGG GGCGCTCTGC TACTGCTACT CGGGCCAGTG CCTCCTCTCC TCGGTCATCG GGGGACGGAG CGGGAACCGC GGGATGTGCG CCCAGCCCTG CCGGAAGCCC TATCGGCTCA TGGCCGCCGG GACGGACGAG TACGGGCGCC CGAAAGACCT GCGGGCGAGG TCCGGATCGG ACCGTTACCT GCTCTCGACC CGTGACCTCT CGGTATACCC GCGCCTCGAC CTCCTTGCAC GTTCGCCGGT GGCCTCGCTC AAGATCGAGG GGAGGATGCG CTCGGTGGAG TACGTGGCCA CGGTGACGGC CATCTACCGG CGCGCTCTCG ACGCGATCGC CGCCGGGGAA GACTGGTCGC CCTCGCGGGA GGATATGCGC GACCTTGCGC TCGCGTTCAA CCGGGAGTTC ACGGAGGGCT ACATCCTCGG CGCCCGCGAT ATCATGGCCC GCGACCGGCC CGGGAACCGG GGCGTCCCGC TCGGCACGGC CATTGGCTAC GACCCGCGGC GGCAGGAGGC GACCGTGCGC CTTACGGGCG ATCTCGTGCC GCGTTCCGGC GACGGGCTCG CCTTCTGCAC CGACGACCCC GACCGCGACA CAGGAGCGGT CGTCCGCGGC ACGCCCGCCG TCCGCCGCGG AACGGTGCGG CTTTCCGTTC CCGCACCCGT CGATCCCGGC GCCCGGGTCT TCCTGACGAA GAGCGCGGAT CTCGAGGAGC GGGCGAAGCG GATCATGAAG AGACCCCTGC AGCCGCTCCC GCTCGACGTG ACGGCCGTCT GGGAGGACGG CACGCCCTGC CTGGAGGCGG TCATCGATCT GCAGGGGAGC GAACCGCTCC GGGTGCGCTA CCGCCCGGAT CTCATGATGG AGCCTGCACG GAGCCGGCCG ATTACCGGAG AGCAGATTGC GGAGCAGCTG ACAAAGACCG GGGGGACGCC GTTTACGATA CGGAACCTGA CGCTCCGCTA CCCCGGCGGG CTCTTTGCAC CGCTCGGGGA ACTGAACCGG GTCAGGCGGG CATTCCTCGA GAGGGTCGAG GAGGCCATGC TCGCTGCACG GCGACCCGGG GAAGACGCGG TGCGTGCCGC CCGGGAGAGG GCCGAAGCGG CAGTTGCCGT GCTGGAACAG CCTGCAGGTT CTCACCGGAA CCCGCGGGTT CCGTCGGTCT CGGTCTACAC CGATACCCTC GAGGGTGCAC AGGCCGCCGT CCGGGGCGGC GCACGCACCG TCTACCTGGA GGTATCCGCT CCGGGCATCC TCGAAGAGGC CGCCGGCGTC TGTCGGGAGG GGGGTGCGGA CCTCGTCTGG AAATGGCCGT CGATCACCCG GCGCACCTTC CTCGACGCGG CGGCTCCCCT CCTCCCATCG CTTTACGATG CGGGCGTCCG CAGGGTGATG GTGAGCGGGA CGGGCGCAGC GGACGCGGTG CGGCGGGCCG AACCCCGGAT GGCGCTCTAC GGCGCCGCCG GGCTGAACCT CTGGAATCAC CGCACCGCCG CGGAACTGGC GCCGCTCTTC CTGCGGTGCA CGGCATCCCC CGAACTCCCG GCCGACGACC TTGCCGGGCT TGCGGCCCTG GCCGGGGATG CCCCCGGACT CGAGGTGCTC GTGCAGGGCA ACGTCGAGGC GATGGTGACC GAGGACAGGC TCGCGGCGGC GGTCGCCGGA GAAGAGTTCC TGGGTCTCCA GGACGGAAGA AACCGCGTCT TCCCGCTCCG GTGCGACGGC GAGGGGCGGA CATACATCGC AAACGCCGTC GAGACCTGTC TCATCGACCG CCTGCCTCAA ATCGCCGCGA TGGGCATCGA CGCCGTCGCC ATCGACGCAC GGGGACGGGG GCCGCGCTAC GCAGCGGAGA TGACCCGGCT CTACCGGACG GGCATCGACG CCGCGGCCCG GGGAGACCAC GGCGTCCTTC CCGGGCTCAA GGACGAGGTG AAACGGCGGG CGCTCGGCGG CATCACCGGC GGGCATTTTG TCAGGGGGAT AGAGGAGTGA
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Protein sequence | MPHDHHKTSG SPELLAPAGS PEALAAAVAA GADAVYLAGR RFGARHYAAN FSDEELESAV GYAHLHGVRV YVTVNVLVRD AELPDVARYL LRLYELGVDA VLVQDIGVAA LAREVVPDLI LHASTQMTIH NREGVVRAAR EGFSRVVLAR ELTLSEIEGI AEDAEARGIG IEVFAHGALC YCYSGQCLLS SVIGGRSGNR GMCAQPCRKP YRLMAAGTDE YGRPKDLRAR SGSDRYLLST RDLSVYPRLD LLARSPVASL KIEGRMRSVE YVATVTAIYR RALDAIAAGE DWSPSREDMR DLALAFNREF TEGYILGARD IMARDRPGNR GVPLGTAIGY DPRRQEATVR LTGDLVPRSG DGLAFCTDDP DRDTGAVVRG TPAVRRGTVR LSVPAPVDPG ARVFLTKSAD LEERAKRIMK RPLQPLPLDV TAVWEDGTPC LEAVIDLQGS EPLRVRYRPD LMMEPARSRP ITGEQIAEQL TKTGGTPFTI RNLTLRYPGG LFAPLGELNR VRRAFLERVE EAMLAARRPG EDAVRAARER AEAAVAVLEQ PAGSHRNPRV PSVSVYTDTL EGAQAAVRGG ARTVYLEVSA PGILEEAAGV CREGGADLVW KWPSITRRTF LDAAAPLLPS LYDAGVRRVM VSGTGAADAV RRAEPRMALY GAAGLNLWNH RTAAELAPLF LRCTASPELP ADDLAGLAAL AGDAPGLEVL VQGNVEAMVT EDRLAAAVAG EEFLGLQDGR NRVFPLRCDG EGRTYIANAV ETCLIDRLPQ IAAMGIDAVA IDARGRGPRY AAEMTRLYRT GIDAAARGDH GVLPGLKDEV KRRALGGITG GHFVRGIEE
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