Gene Memar_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1288 
Symbol 
ID4847253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp1270272 
End bp1270832 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID640115978 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_001047200 
Protein GI126179235 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00113527 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACCC CGGAAGAAGG CAGAACGGCA GTTCGTCTGG CACGCAAAGC CGTCGAGAAA 
GCCGTCGACG GCGAACGGAT GATGCTGCCC GATCTCCCCC CTGTTTTTGG GGAGAAACGC 
GGCGTCTTCG TCACGATCAA GCGGCAGGGA CGCCTCCGCG GATGCATCGG CCTCCCGTAC 
CCGGTAAAAC CGCTCGGCGA TGCGATCCTC GAAGCGGCCG CATCGGCGGC TCTCAAGGAT 
CCCCGGTTTC CCCCGGTATC GCGGCGGGAA CTCGCCGACC TCGATCTCGA GGTGACGGTG 
CTCACGCCCC CGCGGCCGCT CGACTGCCCG CCGGAGGAGC GCCCCAACTG CGTCGAGGTC 
GGGAAGCACG GCCTGATCGT CAGCGGCCTC GGAAGAGGGG GGCTCCTCCT GCCGCAGGTT 
CCGACCGAGT ACGGCTGGGA CAGCAGAGAG TTCCTCGACC AGACCTGCGT CAAGGCCGGG 
CTTTCGCCCG GGTGCTGGCA ACGCGGCGAC GTCGCCGTGC AGACGTTCGA GGGGCAGATA 
TTCGAAGAAA AGGCGGTTTA A
 
Protein sequence
MLTPEEGRTA VRLARKAVEK AVDGERMMLP DLPPVFGEKR GVFVTIKRQG RLRGCIGLPY 
PVKPLGDAIL EAAASAALKD PRFPPVSRRE LADLDLEVTV LTPPRPLDCP PEERPNCVEV 
GKHGLIVSGL GRGGLLLPQV PTEYGWDSRE FLDQTCVKAG LSPGCWQRGD VAVQTFEGQI 
FEEKAV