Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1287 |
Symbol | |
ID | 4847115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1268815 |
End bp | 1270266 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640115977 |
Product | 7-cyano-7-deazaguanine tRNA-ribosyltransferase |
Protein accession | YP_001047199 |
Protein GI | 126179234 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00432] tRNA-guanine transglycosylase, archaeosine-15-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000579108 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTA CTTTTGAAGT CATACACAAA GATATCGCAG GCAGGGTCGG CAAACTCAGG GTGAACGATA AAACAGTCCG GACGCCCGCG CTCCTCCCTG TCGTCAATCC CCACCTCCCC CTGGTCACTC CCCGCGAGAT GCGGGAGATG GGCGTCGAGG CGCTGATCAC GAACGCCTAC ATCTTCAGGC GGAGCACCGA ATTCCACGAC CGGGCGCTTG CAGAAGGGCT TCATGGCGTC CTCGACTTCG ACGGCGTCAT CATGACCGAC TCGGGCTCGT TCCAGCTCTC CGTCTACGGG GAGGTCGAGG TGAGCAACCG GGACACGCTC GAGTTCCAGC AGGCGATAAA AAGCGACATC GTCGTCCCTC TGGATCTCCC GACCCCGCCG GACGCAGGGC CCGGGAGGGC GGCACGGGAA CTCGCGGTCA CGATGGAGCG GATCCGCGAG GCACAGGCTC TCTTCCCGGA TGCGAACCTG GCAGCGCCGG TGCAGGGCGG CATCTTCACC GACCTCCGCG AGGAGGCGGG ACGCGCCGTC CGGGACCTCG ACTTCACCTT CGCTCCCATC GGCGCCGTGG TGCCGCTGAT GGAGAGTTAC CGCTACAAAG AACTCGTGCA GGTCGTCCTT GCGGCGAAAC GCGGCCTCTC CCCGGGTACC GCCGTCCACC TCTTCGGTGC AGGCCACCCG TCGATGTTCG CCCTCGCCGT CGCGATGGGC TGCGACCTCT TCGACTCGGC TGCATACGCC CTCTTCGCGC GGGAGGGGCG CTACATCACC CCCCACGGGA GCCTCAAGAT CGACGAGCTC GCGGAACTCC CCTGCGCCTG CCGGGTCTGC CGCTCGATGA CCGCTGACGA ACTCCGGAAG TCCGAGGACC GGGAGCGGCT GCTCGCCCTC CACAACCTGC ACGTCACTCT TGCAGAGATC GCCCGCATCC GGCAGGCGAT CCAGGACGGG ACGCTCTGGG AGCTCGTCGA CGAGCGGTGC CGGAGCCACC CGCGCCTGCT CGACGGCTAC CGGGAACTCC TCGCCCACGT TGCGGAACTC GAACGCGACG ACCCCGTCTC CAAGCGCCGG TTCTTCTACC GGGGCTCGGA GACCTGCCGG AGAACCGAGG TGCTCCGGTT CCATGAGGTC ATCCCCCGCA TCCCCCTCGG CGAGCGGGTG CTCGTCTCGT TCGACGGGCA GGGTGCGCCC GGGTTCGACA CCGTCCTGAA CTTCAAGCCG CCCTTCGGGC CCTACCCCGT GGAACTCGCG GAAACCTTCC CGGTAGGCCA GAGCGAGGTC CCGGAGTGGG ACGACGATAT GGTCCGGTCG GGATGCGCAG GCATCCGGTC GCTGATGGAG GCGCACCCGG AGAGCCGGTT TACGGTTCAA TGTGGCGAGG TATGGACGCG CCTCGTTCTC GAAGAGGTTC CGGACGCGGA GGTGCTCCAT GAGCAGGTAT GA
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Protein sequence | MAITFEVIHK DIAGRVGKLR VNDKTVRTPA LLPVVNPHLP LVTPREMREM GVEALITNAY IFRRSTEFHD RALAEGLHGV LDFDGVIMTD SGSFQLSVYG EVEVSNRDTL EFQQAIKSDI VVPLDLPTPP DAGPGRAARE LAVTMERIRE AQALFPDANL AAPVQGGIFT DLREEAGRAV RDLDFTFAPI GAVVPLMESY RYKELVQVVL AAKRGLSPGT AVHLFGAGHP SMFALAVAMG CDLFDSAAYA LFAREGRYIT PHGSLKIDEL AELPCACRVC RSMTADELRK SEDRERLLAL HNLHVTLAEI ARIRQAIQDG TLWELVDERC RSHPRLLDGY RELLAHVAEL ERDDPVSKRR FFYRGSETCR RTEVLRFHEV IPRIPLGERV LVSFDGQGAP GFDTVLNFKP PFGPYPVELA ETFPVGQSEV PEWDDDMVRS GCAGIRSLME AHPESRFTVQ CGEVWTRLVL EEVPDAEVLH EQV
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