Gene Memar_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1268 
Symbol 
ID4845939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1249747 
End bp1250811 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content45% 
IMG OID640115958 
Producthypothetical protein 
Protein accessionYP_001047180 
Protein GI126179215 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.721029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGGGC GCAATGATAG CATACAACCC ACAGTTACGG GCGAGTTGAA TACAAGCATC 
TATCAAGGCA TCCGCAATAC CCTTGCGGAA GCACGGTCAA AAGCCTATTC TGCTGTTAAT
TCCGCTATGG TTGAGGCTTA CTGGGAGATC GGGCGGCAGA TAGATGAAGC CGTTGGTGAA
CGCGCCGAAT ATGGAAAAGG TCTGCTGAGA TATTTGGCGG GGCAGTTGAC TTCAGAGTTT
GGTAAAGGCT TTGATGAAAG CAGTTTACGC CGAATGCGTC AATTTTTCAA GACGTTTCCA
ATTCGTGCCA CACTGTGGCA CGAATTGAGT TGGTCTCACT ATCGCCTGCT TATGAAGATC
GAAGATCAGT CGCGGCGTGA GTTTTATGGA CGTGAATGTG CTGAAGCGGC CTGGAGTGTT
CGTCAATTGG AGCGGCAGAT AAACTCGTTC CTTTATGAAC GTCTGCTCGC CACACAAAAA
AGCGGAGCTG AAAGCGTGAA AAACGAAATT CACACGCTTG AACCGAAAAA TGATCCCGAT
TATATCCTCA AAGACCCCTA TATTTTGGAG TTTTTGGATT TGAAAGAAAA TCGTGATTAT
CACGAAAACG ATTTGGAACA GGCTTTAATC AACAAACTGC AAGAGTTTTT GCTCGAACTT
GGAAAGGGCT TTTCATTTGT GGCACGCCAA AAGCGGATAA CAATTGAGGG CGACCATTAC
TATGTCGATC TCGTTTTTTA CAACTATATC CTTAAATGCT TTGTAGTCAT CGATTTAAAG
GCAGGAAAGC TGACTTATCA AGATGTCGGC CAAATGGACT TCTATGTCCG ATATTTTGAG
GATAAGGTGA AATTGCCGGG TGATAATCCC ACCATAGGGA TTATTCTCTG CACCGACAAA
AACGATACGA TGGCAAAATA CTCTGTGCTG TCAGATAATG AAAATCTGTT TGCCTCAAAA
TATATGCTCT ATCTTCCCAC AGAGGAAGAA TTGAAGCACG AATTAAAACG TGAACGCGAG
CTTATTGAGC GTCAGAAGGC CATGGACGAG GGGGCAGACA AATGA
 
Protein sequence
MNGRNDSIQP TVTGELNTSI YQGIRNTLAE ARSKAYSAVN SAMVEAYWEI GRQIDEAVGE 
RAEYGKGLLR YLAGQLTSEF GKGFDESSLR RMRQFFKTFP IRATLWHELS WSHYRLLMKI
EDQSRREFYG RECAEAAWSV RQLERQINSF LYERLLATQK SGAESVKNEI HTLEPKNDPD
YILKDPYILE FLDLKENRDY HENDLEQALI NKLQEFLLEL GKGFSFVARQ KRITIEGDHY
YVDLVFYNYI LKCFVVIDLK AGKLTYQDVG QMDFYVRYFE DKVKLPGDNP TIGIILCTDK
NDTMAKYSVL SDNENLFASK YMLYLPTEEE LKHELKRERE LIERQKAMDE GADK