Gene Memar_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1266 
Symbol 
ID4847771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1246666 
End bp1247838 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content63% 
IMG OID640115956 
Productglycosyl transferase, group 1 
Protein accessionYP_001047178 
Protein GI126179213 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.610895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGC TTAAGTTAGC ATTCTTCTGC TGGGAGTCGC TCCATTCCAC GTTCAAGGTG 
GGCGGCCTTG CGCCGGCGGC GACCCATCTC GCCGAGCGCC TTGCCCTGAT GGGGCACGAG
GTCCATTTCT TCACGCGGGG AGAGGGAGAC GACGCGACAA TCAACGGCGT CCGCTACCAC
TACTGCCTGC CGTACGGCGA CAACGTCATC GAGTACTGCA GGACGATGAG CAACATGCTC
GTGGACGCGT TCCGCGCTCA CGACACGCCG CCGTTCGACA TCCTCCATTT CCACGACTGG
CACCTCGTTG AGGCGCTGCA TGTTCTCCGT GACAGGAACA CCGTTCTCTC CTTCCACTCC
ACCGAGTACG GCCGGCACGG GGGGAATTTC GGCGGCTGGT GGGAGTTCCA GGAGATATCG
GGCAAGGAGT GGTACGGGGG CTACATCGCA AAGGCGGTCA CGACCGTCTC CAATTCAACG
AAGACCGAGG TGATGTGGCT CTACAACGTC CCCGAATGGA AGGTCACCGT CATCCCGAAC
GGGATCGATC CCGATGCCTA CCGCGCCCGG GTCGACCCGG GCGAGGTGAA GAAGCACTAC
GGCATCCATC CGCTCGCACC CGTCGTCCTC TTCGTCGGGC GCCTCACCTA CCAGAAAGGG
CCCGACCTCC TGATGCAGGC CATACCCGAG ATCCTCGCCA AACGCTGGGA CGTGCAGTTT
CTCTTCGCCG GCACCGGGGA TATGCGCGGT TACCTGGAAG GGACGGCGAA CGGTCTTCCC
GTGCAGTTCC TCGGCTACGT CTCCGATGAG GATCACGTCC GGCTCCTGAA CGCGTGCGAC
CTTGTCGCCA TCCCGAGCAG GAACGAGCCG TTCGGGCTCG TCCTCACGGG GGCCTGGAGT
GCGGAGCGCT GCGTCGTCGC GACCGACGTC GGGGGGCTCG CCGAGAATAT CGACAACTTC
AAAAACGGGA TCAAGGTTCC CGTCCGGTCG GACTCGATCG CCTGGGGGGT CTGCCACCTC
ATCGACGATC CGGCCTACAT GCAGAAACTC GGGAGAGCCG GCCGCAGGAA AGTGATGGAT
ACGTTCCGGT GGAGCGTCGT CACGGAACGG ATGCTCGGCG TCTACAGGGA CATCCCCCTG
GCGGGCCGCG ATGAAGATAC CTGGGACGGG TGA
 
Protein sequence
METLKLAFFC WESLHSTFKV GGLAPAATHL AERLALMGHE VHFFTRGEGD DATINGVRYH 
YCLPYGDNVI EYCRTMSNML VDAFRAHDTP PFDILHFHDW HLVEALHVLR DRNTVLSFHS
TEYGRHGGNF GGWWEFQEIS GKEWYGGYIA KAVTTVSNST KTEVMWLYNV PEWKVTVIPN
GIDPDAYRAR VDPGEVKKHY GIHPLAPVVL FVGRLTYQKG PDLLMQAIPE ILAKRWDVQF
LFAGTGDMRG YLEGTANGLP VQFLGYVSDE DHVRLLNACD LVAIPSRNEP FGLVLTGAWS
AERCVVATDV GGLAENIDNF KNGIKVPVRS DSIAWGVCHL IDDPAYMQKL GRAGRRKVMD
TFRWSVVTER MLGVYRDIPL AGRDEDTWDG