Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1265 |
Symbol | |
ID | 4847831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1244733 |
End bp | 1246661 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640115955 |
Product | glycogen branching enzyme |
Protein accession | YP_001047177 |
Protein GI | 126179212 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.24267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGCAGG CGTTGCCCGA CATCACGAAG ACCGGGACTC TCGTCACCGA CTACGATGTC TACCTCTTCC GGCAGGGTAA CCACACCCGC CTCTACGAGA AGCTGGGAGC GCATCCCGCC GTCGCCGACG GTGTGCAGGG GACGTTCTTT TCCGTCTGGG CGCCGAACGC CGCGGAAGTC TCGGTCATCG GGGACTTCAA CGGATGGAAG GCGGGCGAAC ACCCGCTCAC GGCGCGGGGC GACAACTCCG GCATCTGGGA GGGGTTCGTC CCGGAACTCG GCCAGGGGGC GCTCTACAAA TACCACATCA GGAGCAGGTA CCGCGACTAC TGCGTGGAGA AGGGCGACCC GTTCGCCCGC TTCTGGGAGG TTCCGCCGAA GACCGCGTCC GTTGTCTGGG ACACTGCCTA CGCCTGGCGC GACCGGTCGT GGATGCGCTG CCGGGAAGAG GCGAACACCC CGGACGCCCC GGTATCCGTC TATGAGGTTC ATATCGGTTC GTGGCGGATG CCGGAGGGGG AGAGACGGTG CACGAGCTAC CGGGAGCTTG CAACCGAACT CGCCGACTAC CTGCTCGAGG CGGGGTTCAC GCACGTCGAG TTTCTCCCGG TCATGGAGCA TCCGCTCTAC GCCTCCTGGG GCTACCAGAC GCTCGGCTAC TTTGCCCCCA CGAGCAGGTA CGGCACCCCG CAGGACTTCA TGCACCTCGT CGAGCACCTC CACCTGCGCG GGATCGGGGT AATCCTCGAC TGGGTGCCGT CCCACTTCCC GTCCGACGGC TACGGCCTCT CCTACTTCGA CGGCACCTAC CTCTACGAGC ATGCCCTCCC CGGCCGGCGC TACCACCCGG AATGGAAGAG TTACGTCTTC AATCTCGCGA GGAACGAGGT CAGGTCGTTT CTCATCAGCA GCGCCGTCTT CTGGCTCGAA CGCTACCACG CGGACGGTCT CCGGGTCGAC GCGGTCTCTT CGATGCTCTA CCTCGATTAC GCCCGGAGCG CCGGAGAATG GACGCCGAAC GTCTACGGCG GGCGGGAGAA CCTCGAGGCG ATGGTGTTTC TCCGGAAGGT GAACGACACT GTCCACGCCA ACTTCCCGGA CGTCCTCGTC ATCGCCGAGG AGGCGACCGC CTGGCCGGGG GTGACCGCCC CGACCGCGAC CGGGGGGCTC GGGTTCGACC TGAAGTGGAA CATGGGCTGG ATGCACGATG CGCTGGACTA CTTCACGCTC GACCCGGTCT TTCGGAAGTA CCGCCCCGAT CTCCTGACGT TCAGCATATG GTACGCGTTC TCCGAGCGTT ATGTCCTCCC CCTCTCGCAC GACGAGGTCG TTCACGAGAA AAGTTCGCTC ATCGGGAAGA TGCCCGGCGA CGAGTGGCGG AAACGGGCGA ATCTTCGTCT CCTATATGGG TATATGTTCA CGCACCCGGG CAAGAAACTC CTCTTCATGG GGGGCGAGTT CGGGCAGTGG CCGGAGTGGA GCCACGAGAC CGGGCTCGAG TGGGACCTCC TGCAGTACGC CCCGCACCAG GGGATCCTCC GGTGGGTTAC CGATTTGAAC CGCCTCTACC GGCGGAAGCC TGCCCTCCAC GAGCGGGACG CCGATCAGGC GGGGTTCGAG TGGGTCGATT TCTCGGACGT CGAGAAGAGC GTCGTCAGCT ACCTGCGGCG GGGGCGGTCG GCCGACGACG TCGTCCTGGT CATCTGCAAC TTCACCCCGG TGCCGCGCTA CGACTACCGG ATCGGCGTCC CGTTCGGCGG GTTCTGGAAA GAGGTGCTCA ACAGCGATGC GGTCGAGTAC GGCGGGAGCG GTGTCGGGAA CCTCGGCGGG GTGGAAGCGG AGCGAATCCC GGCCCACGGC CGGTCGTGTT CGCTTCCGCT CACCCTGCCC CCGCTCGGGG TGGTCGTCTT CTGTCCCGAG GGGGCGTGA
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Protein sequence | MQQALPDITK TGTLVTDYDV YLFRQGNHTR LYEKLGAHPA VADGVQGTFF SVWAPNAAEV SVIGDFNGWK AGEHPLTARG DNSGIWEGFV PELGQGALYK YHIRSRYRDY CVEKGDPFAR FWEVPPKTAS VVWDTAYAWR DRSWMRCREE ANTPDAPVSV YEVHIGSWRM PEGERRCTSY RELATELADY LLEAGFTHVE FLPVMEHPLY ASWGYQTLGY FAPTSRYGTP QDFMHLVEHL HLRGIGVILD WVPSHFPSDG YGLSYFDGTY LYEHALPGRR YHPEWKSYVF NLARNEVRSF LISSAVFWLE RYHADGLRVD AVSSMLYLDY ARSAGEWTPN VYGGRENLEA MVFLRKVNDT VHANFPDVLV IAEEATAWPG VTAPTATGGL GFDLKWNMGW MHDALDYFTL DPVFRKYRPD LLTFSIWYAF SERYVLPLSH DEVVHEKSSL IGKMPGDEWR KRANLRLLYG YMFTHPGKKL LFMGGEFGQW PEWSHETGLE WDLLQYAPHQ GILRWVTDLN RLYRRKPALH ERDADQAGFE WVDFSDVEKS VVSYLRRGRS ADDVVLVICN FTPVPRYDYR IGVPFGGFWK EVLNSDAVEY GGSGVGNLGG VEAERIPAHG RSCSLPLTLP PLGVVVFCPE GA
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