Gene Memar_1260 details

Gene Information

• Locus tag: Memar_1260
• ID: 4846049
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1236591
• End bp: 1237337
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640115950
• Product: hypothetical protein
• Protein accession: YP_001047172
• Protein GI: 126179207

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.186802
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGATA AATTACCGGA AGGGAAGGTC ATCGGGGAGA TGCAGGCACC GCTCCAGTGG 
ATCTTCTCTC ACACGACCAG GTTTTCCGGG GCGGTGCGGA TCACGATGCA GGACGGAAAA 
GGGTTCATGC TGGTGCAGAA GGGAGAGCCT CTCGCCGCAC AGTTCATGCA TCCGCTGAAA 
TCCCTGAGCG GGCCGTCGGC GTTGAAATAC TTCGGCAGCC AGCCGATCCT CGACTTCGGC 
CTCTTCCGGT ACGAGCCCCG GGAGATGCAG GAGGCCCTCG CCGTATCGGC AGAGATGCAG 
GCCCTCCTGC AGCCCGGCCG CGAATCTCTC GTGGCCGACC ATTCAGGGGA GAGCAACGGG 
CACGATATCG TGACCGAAAC CGAGCACGAA GATACCGTAC CCAACGATGC ATCTCCCGGA 
GAGGTACCCG ATTCGCTCGG GACGTTGCTG AAGCACCCCG GGGTGACCGC GGTTGCCTGT 
TTTGCCGAAG GCCTCTGCAC CTCATCGGTC GGAAAGATCG ATGCCGAATC TACCGTCGCC 
TTTGCCGAGG ACCTGCTCCG GTGGGCGATC CGCCTGCCAT CGGCTGCGCC GTCAAACGGG 
GCATTCGTAC AGATGACACT CTTTTATCGC GGCGGAAACG TCGTCATCGC CCCCTACGGC 
GATGAATATC TCTGTGTCTT TACCCGGCCG GAGGTGCAGT TCGGCCAGGT ACGGCGAATG 
ATCAGGGAGA TGCACGGCGG AATATGA 

 

Protein sequence

MTDKLPEGKV IGEMQAPLQW IFSHTTRFSG AVRITMQDGK GFMLVQKGEP LAAQFMHPLK 
SLSGPSALKY FGSQPILDFG LFRYEPREMQ EALAVSAEMQ ALLQPGRESL VADHSGESNG 
HDIVTETEHE DTVPNDASPG EVPDSLGTLL KHPGVTAVAC FAEGLCTSSV GKIDAESTVA 
FAEDLLRWAI RLPSAAPSNG AFVQMTLFYR GGNVVIAPYG DEYLCVFTRP EVQFGQVRRM 
IREMHGGI