Gene Memar_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1249 
Symbol 
ID4847494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1225196 
End bp1225954 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content71% 
IMG OID640115939 
Producthypothetical protein 
Protein accessionYP_001047162 
Protein GI126179197 
COG category[S] Function unknown 
COG ID[COG3390] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCTG CAGAACGGGT ATTTGCGCAG GACTTCTCCG CCGCGCGGCA CACGGCGGAC 
GCCGGCGACG GCCGGAACGG CTCGTACGTG GTGACGCCGG GGGCCGCCTG GTGCCGCCGC
CTCTTCATCG TCGGCGCCCT TACCGAGAAG AGGGGGAGCG GCGACGTCAT GCAGGCCCGG
CTTGCCGATC CCACCGGCGC GTTCCAGGTC TCGGTCGACT GGCAGAGCCC GGACGCGGTC
GAGACGCTGG GCTACATCGA ACCGCCCGCG TTCGTCGCCG TCACCGGCCG GGCGGCGCTG
ACCGGATCCA GTGAGAGGGC ATGCGCGACG GTGGAGGCCG AGGCGCTCTC TGTGGTGAAC
CGCACCGCCC GCGACCTCTG GGTGCTTGAG ACCGCCGGCG CGACCCTCGA CCGGCTCGAA
TCGCTCCGGG ACGGCGGCGA CGAACGGATC GAAGCCGCCC GCCGCCTCTA CGGGATCACG
GACGAGGATA TCCGCGGGAT GGCCGCGATG GTGAGTACAG CCCTTGCAAC CGTCCGCACG
GATATCGCCG TCGGCGCGAT CGCGCCCCTT GTCGCCCGCG ACCTCCTCCT CGATGCCCTT
GAGGGAGAAG GCGGCGCCCG GGGCACCGGG TTTGAAGACG CCGTCGCCAT CGGGGTGCGC
TCGGGCCTCT CCGCCCGGGA GGCACGCGCC GCGCTCGAGG AACTCCTCGC CGCAGGGGAA
TGCTACCAGC CCGCATCGGG CATGATAAAA CTGATCTGA
 
Protein sequence
MEPAERVFAQ DFSAARHTAD AGDGRNGSYV VTPGAAWCRR LFIVGALTEK RGSGDVMQAR 
LADPTGAFQV SVDWQSPDAV ETLGYIEPPA FVAVTGRAAL TGSSERACAT VEAEALSVVN
RTARDLWVLE TAGATLDRLE SLRDGGDERI EAARRLYGIT DEDIRGMAAM VSTALATVRT
DIAVGAIAPL VARDLLLDAL EGEGGARGTG FEDAVAIGVR SGLSAREARA ALEELLAAGE
CYQPASGMIK LI