Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1202 |
Symbol | |
ID | 4845912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1178384 |
End bp | 1179202 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640115892 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_001047115 |
Protein GI | 126179150 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.27385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACGAT GGATAACTCT ATGCGCGTGC ATTCTTGCTC TTCTTGCGAT GCCGTTTGCC GTAACGGCGG CGGTAATCGG AGACGAGAAT GCAACGGCGA CGCCCATGGG CGAGACCGGG CAGATGGATA ACCAGACGGC GAACATGACG ATTGCCGCCT ACATCGAGCA GGACGAGAAC CTGACACGGC TGGCCGAAGC AGTCGCCGTG GCGGGGCTCT ACGACACCCT GAACGGCGAG GGCCCGTACA CGGTCTTTGC CCCGAGCAAC GAGGCGTTCG ACGCTCTCGG GAACGACACC GTGAACCAGC TCATGAACGA GACCGACAAC CTGACGATGG TTCTCCAGTA TCACGTCGTC GAGGGCGAGT ACCTGTCGGC GAACTTCACC AACATGACCG ATGAGCAGGC CGGACAGGAG AACCAGACTG CCGGAAACGA GTCCGAAGGC GGTGTGCTTG ATATCTTCAG CGGGCTTCTC GGCGGCGAGA ACGAGACCGC GAGCGAGAAC ATGAGCACGC TCGTCACGCT TGCCGGCGAG GACCTGAACG TCTCCGCCAC CGACGGCGAG GTCATGGTCG AGAACGCCAC CGTCACCGTG GCGGACATCA ACACGACGAA CGGCGTGATC CATATCATCG ACCTGGTGCT GGTGCCGCCG GGCGTGAACC TGACGGCGGG CGGGGAGACA CCGACCACGA TGCCGGCCGG GGAGACGCCG ACCACGCCGA TGGGTGAGAT GACCACGATG CCGGTCGGGG AGACACCGGC CGCGACGATG GCCGAGAACC AGAGCGCCCT GATAGGCATC GTACAGTGA
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Protein sequence | MRRWITLCAC ILALLAMPFA VTAAVIGDEN ATATPMGETG QMDNQTANMT IAAYIEQDEN LTRLAEAVAV AGLYDTLNGE GPYTVFAPSN EAFDALGNDT VNQLMNETDN LTMVLQYHVV EGEYLSANFT NMTDEQAGQE NQTAGNESEG GVLDIFSGLL GGENETASEN MSTLVTLAGE DLNVSATDGE VMVENATVTV ADINTTNGVI HIIDLVLVPP GVNLTAGGET PTTMPAGETP TTPMGEMTTM PVGETPAATM AENQSALIGI VQ
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