Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1171 |
Symbol | |
ID | 4848376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1152429 |
End bp | 1153739 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640115860 |
Product | hypothetical protein |
Protein accession | YP_001047084 |
Protein GI | 126179119 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000157605 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACCC CTGAAGACCG CTCACGGCAA GCGAACGAGC TGAGGAAGAG CGGGAGATGC AAAGATGCTC TGGAGATCTA TCGTGATCTC TGGGACGGTC AGTATTACAA CGAATATACT GCTGCGGGCC TGTTGCACTG TCTCCGGAAA CTGCACCGCC TCGACGAGGC GATGACCTTC GCCGACGATA TCGCCGCGCG TTACCCCGAT CACAACTGGG TAAACCTGGA GGTCGCGTGG GCATACGCCG ACTATGTCAA GGGAATGGCA GAGAACGGGG CGTCTGTCCC GGTGCTCCAT GCCTGCGGAG AGAAGGCTCT CTCCAGAAAC CCACCACCAC AGGCGGTGAG CCATATCGCC TTCGCCATCA TGAGACCGGC AAAAGATGCC AAAGACTGGC ATACGCTGGC GGCATGGACG TCGCGGGTCG ATCCGTTGCT GCTCAGCCCA ACGGGGATGA AGCTCCCCGA CGGAAAAGAA GGCTGGAGTT ACCTTGCCCG CTGGTATCAC TACCGGAACA TGGGGCTCAT CGGAACGGGG CGCGCGCAAG ACGCCCTTCC TTTTTGCCGT GAAGCGATTG AGAGGTTCCC CAATCAGTAC AAATTCTTTG CATACGATCT CGCCAGGGCA TATGCAGGCA TCGGCGAGTA CGAAAAGGCG GCAGAGACGT TTGACGAACT CTGCCGGAAT GTCCGGCCGG ACTTCTACCA CCTCTTCGAG TATGGGAAGG TCGTCCACCA GCTCGGCCGT CCGGAAGAGG CGCTGACACT GATGACCCGG GCCGCGAAGG CAGGGCAGCG CCCGGAGTTC ATGGTCGGAT ACTTTATGGA GATGGGTGAC ATCTTCAAGC AGGTCGGTCG CCTGGACGCG GCCCGCGACC ACTATACGCT GGTGACAGCC CTGCGGATGC GGATGTCATG GTCCATTCCT CCTGAATTGC AGCAGCGCCT CGATGAGAAC GCCATCTCTT CGATCGAGGA CTCCGTTGAG GAACTCACCT ATCGGTGCAG CCGCCACTGG AGCAGCTGCG AAACCGGGCA GAGTCCCCTG ACGGCGCAGC ATGAGCGGGA AAAGCCGCTT GCGGAGGGGG TAGTTGGCAG GATCTTTCTC GGGCATCCGG ACCGCGAGTA CTTCTTCATC AACCCGCCGG ACGCTGACGG ATACATCGGG TTCAAGAAAG AGCTCACCTG GGCACCGGAG GACCGGAGCA AGGTTGTATT CGACGTTGTT CCGTCGTTTA ACCGGAAGAA GAACGAGTGG GCTGCAAAGG CAGTGAACGT CCGGCCGAAG GACGATACTG GAGCACGATA G
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Protein sequence | MDTPEDRSRQ ANELRKSGRC KDALEIYRDL WDGQYYNEYT AAGLLHCLRK LHRLDEAMTF ADDIAARYPD HNWVNLEVAW AYADYVKGMA ENGASVPVLH ACGEKALSRN PPPQAVSHIA FAIMRPAKDA KDWHTLAAWT SRVDPLLLSP TGMKLPDGKE GWSYLARWYH YRNMGLIGTG RAQDALPFCR EAIERFPNQY KFFAYDLARA YAGIGEYEKA AETFDELCRN VRPDFYHLFE YGKVVHQLGR PEEALTLMTR AAKAGQRPEF MVGYFMEMGD IFKQVGRLDA ARDHYTLVTA LRMRMSWSIP PELQQRLDEN AISSIEDSVE ELTYRCSRHW SSCETGQSPL TAQHEREKPL AEGVVGRIFL GHPDREYFFI NPPDADGYIG FKKELTWAPE DRSKVVFDVV PSFNRKKNEW AAKAVNVRPK DDTGAR
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