| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1151 |
|---|
| Symbol | |
|---|
| ID | 4848317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1134282 |
|---|
| End bp | 1135982 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640115840 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001047064 |
|---|
| Protein GI | 126179099 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGACCG CGGTTCCCGC GGGGATACAG CCTGCAAACG CCCGGGAGCC GAATATGACC
GATTACGAGG CCGCCTGCGC CAACTTCACG ATCGACGTCC CCGACCAGTT CAACTTCGGC
TACGACGTGA TCGACCGGTG GGCCGAGACC GACCGGAACA AGCTCGCCAT GATCTGGGTG
AACCAGGAAG GGGAAGAACG GAAGTACACG TTCCGCGATC TGCGGTACCT CTCCAACGGT
GCCGCGAACA TCCTCCTCAA GTACGGCATC AAGAAGGGCG ACCGGGTCAT GCTGATGCTC
CCGCGGATCC CGGAATGGTG GATCTTCGTC ATCGCTCTCA TCAAACTCGG CGCGGTCTTC
TGCCCCTGCC CGACGATGCT GACGCCGAAG GACATCAAAT ATCGCGTGCA GGCCGGGAAG
TTCCGGATGA TCATCACGAA CTTGGAGAAT GCCGAGAAGG TCGACGAGGT CGCCGATGCC
TGCCCGCTGC TCGACACCCT CTTCCTCGCG GACGGGGAGC GGGAGGGCTG GGCGAGTTAC
CCGCACGAGA TTGAGTACCC TGCACCGGTA TCGCACCACA AGGTCAGCAT GCCGGTCGCG
AAGAAGACGA AATCGATCGA CCCGATGATG ATCTACTTCA CCTCGGGCAC CACCGGCGAG
GCCAAGATGG TGCTGCACAA CCAGAGTTAC CCGCTCGGGC ACATCATCAC CGCCTCGCTC
TGGCAGGACG TCACGGAGAA CGACCTGCAC CTGACGTTCT CCGATACCGG CTGGGCGAAG
TGCGCCTGGG GCAAGATATT CGGCCAGTGG ATCGCCGGAG CCTGCATCTT CGTCTACGAT
ATCCGGGGGA AGTTCGGCGC GACCGAGCTC CTCCCGCTGA TCGAGAGGTA CGAGGTGACC
ACGTTCTGCG CACCGCCGAC GGTCTACCGG ATGCTGATCC TCGCCGATCT CGACAAGTTC
GACTTCCGCG ACCTGCGGCA CTGCTGCAGC GCCGGGGAAC CGCTCAACCC CGAGGTGATC
CGCGTCTGGG AGGACGGCAC CGGGCAGGCC ATCTACGAGG GATACGGCCA GACGGAGACC
GTCTGCTGCA TCGCCACGTT CCCCTGCATG CAGCATAAGC CCGGGTCCAT GGGGAAACCC
GCACCGGGCT GGCATATCGA GCTCCACGAC GACGACGGCA ACCCGGCCGG CCCCGGCGAG
GAAGGGCGGA TCGCGGTCAA ACTCGACCCC CGGCCGGTCG GGCTCTTCGT TGAGTACCTG
GACAACCCCG AGGCGAACCG GGAATCGTTC CAGAACGGGT ACTACTACAC CGGCGACAAG
GCGCGTATGG ACGAGGACGG CTACTTCTGG TTCATCGGAA GGAGCGACGA CGTCATCAAG
TCGTCCGGCT ACCGGATCGG GCCGTTCGAG GTCGAGAGCG CCCTCATGGA GCACCCGGCC
GTCCAGGAAT CGGCGGTCGT CGGGTCGCCC GACCTCATCC GGGGGATGGT CGTCAAGGCC
TTCATCGTGT TGAAGCCCGG CTACCAGCCG TCCGAATCGC TGGTCAAGGA ACTTCAGGCC
CACGTCCGGA ACACCACCGC CCCGTACAAG TACCCGCGGG CGATCGAGTT CGTCCAGGAA
CTCCCGAAGA CGATATCCGG CAAGATCCAG AGGAACGTCC TGCGGGACCA GGAACTGCGG
ATGAGTAATA ACGGGAACTG A
|
|---|
| Protein sequence | MQTAVPAGIQ PANAREPNMT DYEAACANFT IDVPDQFNFG YDVIDRWAET DRNKLAMIWV
NQEGEERKYT FRDLRYLSNG AANILLKYGI KKGDRVMLML PRIPEWWIFV IALIKLGAVF
CPCPTMLTPK DIKYRVQAGK FRMIITNLEN AEKVDEVADA CPLLDTLFLA DGEREGWASY
PHEIEYPAPV SHHKVSMPVA KKTKSIDPMM IYFTSGTTGE AKMVLHNQSY PLGHIITASL
WQDVTENDLH LTFSDTGWAK CAWGKIFGQW IAGACIFVYD IRGKFGATEL LPLIERYEVT
TFCAPPTVYR MLILADLDKF DFRDLRHCCS AGEPLNPEVI RVWEDGTGQA IYEGYGQTET
VCCIATFPCM QHKPGSMGKP APGWHIELHD DDGNPAGPGE EGRIAVKLDP RPVGLFVEYL
DNPEANRESF QNGYYYTGDK ARMDEDGYFW FIGRSDDVIK SSGYRIGPFE VESALMEHPA
VQESAVVGSP DLIRGMVVKA FIVLKPGYQP SESLVKELQA HVRNTTAPYK YPRAIEFVQE
LPKTISGKIQ RNVLRDQELR MSNNGN
|
|---|
| |