| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1140 |
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| Symbol | |
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| ID | 4847034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1121028 |
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| End bp | 1122059 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640115829 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_001047054 |
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| Protein GI | 126179089 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.703193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTAG GTAAGGAGAT CCTCGATACG CTTCACGCTC TCGTGGACCG TGATATCACG
CTCATGCACA TCTGCGGCAC CCACGAGGCG GCGATCGCGC GCGCCGGGCT CAGGAGCGTC
CTTCCCCCGG GCCTCAAGAT CGTGATGGGA CCGGGCTGCC CGGTCTGCAT CACGCCGCAG
GGCGAGATCG ACGCCGCGCT CGACCTGGTG GAGCGGGACT GCACCATCGC CACCTACGGC
GACCTGCTGC GTGTCCCGGG GTCGAAGGGC TCGCTCGAGT CGAGCGGCGG AGACGTCCGG
GTGGTGCAGG GCGTCCACAA GGCGGTGGAG ATCGCCCGGC GGGAACCGGA CCGGGAGGTC
GTCTTCATAT CGGTCGGGTT CGAGACGACC GCACCGACGG TCGCCGCCAC GATCCTCTCC
CGCCCGCCGG AGAACTTCTC GATCCTCTCG TGCCACCGGC TCGTCCCGCC CGCGATGGCA
TGGCTCCTCG CCCAGGGCGA GGCGTCGCTC GACGGGTTCC TCCTCCCGGG ACACGTCTGC
GCGGTGATGG GCTACGAGGA GTACGAGCAG TTCCCCGTCC CGCAGGTCGT CGCGGGGTTC
GAGCCGGAGG ACATCCTCCT CGCCCTCCTG ATGGCGGTCA GGCAGGTCAA GGAGGGGGCG
CACCGGGTGG AAAACGCCTA CCCGCGCGTG GTCACCCGGG AAGGGAACGT CAAGGCGAAA
CGCCTGATGT ACGAGGTCTT CGAGCCGTAT GACGTCGAGT GGCGCGGATT CCCGGTGATC
CCGGCCTCCG GCCTCCGCCT GAAACCGGAG TTCGAGGGCT ACGACGCGCA GAAGAAGTAC
GATATCGAGA TCCGGCACGT GGACAAGCAT TCCGCCTGCA TCTGCGACAA GGTGCTGCGC
GGCATCGCCC GGCCGTCCGA CTGCAAGCTC TTCGGGAAGG CCTGCACCCC GCGCACCCCC
GTCGGCCCCT GCATGGTCAG CCACGAAGGG GCGTGCAAGA TATGGCATCT CTACGAATCG
CGGAGGGCAT GA
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| Protein sequence | MAVGKEILDT LHALVDRDIT LMHICGTHEA AIARAGLRSV LPPGLKIVMG PGCPVCITPQ
GEIDAALDLV ERDCTIATYG DLLRVPGSKG SLESSGGDVR VVQGVHKAVE IARREPDREV
VFISVGFETT APTVAATILS RPPENFSILS CHRLVPPAMA WLLAQGEASL DGFLLPGHVC
AVMGYEEYEQ FPVPQVVAGF EPEDILLALL MAVRQVKEGA HRVENAYPRV VTREGNVKAK
RLMYEVFEPY DVEWRGFPVI PASGLRLKPE FEGYDAQKKY DIEIRHVDKH SACICDKVLR
GIARPSDCKL FGKACTPRTP VGPCMVSHEG ACKIWHLYES RRA
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