Gene Memar_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1084 
Symbol 
ID4847774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1072636 
End bp1073223 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content65% 
IMG OID640115772 
Productmembrane-flanked domain-containing protein 
Protein accessionYP_001046999 
Protein GI126179034 
COG category[S] Function unknown 
COG ID[COG3402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.491296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTTC CCGGCCCGGT GAACGGGCAG GCTCCGGCCG ACGAAGGATC GCCGGAACCC 
GGGGCGGGCG CGGACGGTTA CCGCCGGCTG AACCGGAAGT GCATGCTCTC GATGTACATC
GACTACGCCA TGTGGTATGC GGTTCTGCTC GTGGCCTACA TCCTCACGAA GACCTACGCA
GAGGGATTCC TGGGGTCCTA CTACGATCTT ATCAGGTACG GCTTCTTGCT CGTCCTGGGG
ATCGCCCTGG TTTACATAGC CGCGGCTCCG CCGGTCTTTT ACGCCCGGTA CCGCTACCGG
ATCACCGAAG ACCGGGTGGA CGTGCGCTGC GGGGTCCTCT TCATCCGCCA CACCCTGGTG
CCGATCGAGC GGGTGCACCA GGTGGAGATC ACCAGAGGCC CGATAAACAA CCTGCTCGGC
CTCGCGGACG TCACCATAAC CACTGCAGGG GGCGAGGCGG ACATCAGGTA CCTCGAGATT
GACGAGGCGG AGACGGTGGC CGACCGGCTC AACAACCTGG TCGGGAGGAT GCTCCGGGAC
AGGATGCCGG CGACCCCCAT CCCCCGGCCG GGGGCTGCAG ACGAATGA
 
Protein sequence
MSFPGPVNGQ APADEGSPEP GAGADGYRRL NRKCMLSMYI DYAMWYAVLL VAYILTKTYA 
EGFLGSYYDL IRYGFLLVLG IALVYIAAAP PVFYARYRYR ITEDRVDVRC GVLFIRHTLV
PIERVHQVEI TRGPINNLLG LADVTITTAG GEADIRYLEI DEAETVADRL NNLVGRMLRD
RMPATPIPRP GAADE