| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1081 |
|---|
| Symbol | |
|---|
| ID | 4846247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1069370 |
|---|
| End bp | 1069921 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640115769 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001046996 |
|---|
| Protein GI | 126179031 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4739] Uncharacterized protein containing a ferredoxin domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.15427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTTTG AATCAGACGC CGTAGAGGTG GTCGCCCGGC TGATGGCGCT CTCTGCCCGC
ACCGCGCCGA AGGCCCGGGG CACCGACGTC ATCAAGACGA TGATCGTCAC CGAAGAGGAG
AAGGAGCGAC TCGCCGGGGC GATGCGGGAG TACGGCGAGA AGCACGACGC GGTTTTCTTC
ATCAGGGACG CGGGCAACGT CGTGGCAAGC GACGCCTGCC TCCTCGTCGG GTCGCTCTAC
GCCGACGCCG TGGGCCTCGA CTGCGGCGGG TGCGGCTACG CCACCTGTGC GGAGATGCTC
GACGCCCAGC GCGAGTTAAA CCCGCCGGCA ACGCCGTTCC GGGGCCCGAA CTGCATTGTG
CGGATGGCGG ATCTCGGGAT CGCGGTCGGT TCCGCGGTGA AGACCGCGAG CCTCCACAAC
GTCGACAACC GGGTCATGTA CACCGCCGGC GTCGGGGCGC TCTCGCTCGG GTGGCTGGAA
GGCTGCGGCG TCGCTTACGG CATCCCGCTC CGGGCATCGG GAAAGGATAT CTTCTTTGAC
CGTACACGCT GA
|
|---|
| Protein sequence | MVFESDAVEV VARLMALSAR TAPKARGTDV IKTMIVTEEE KERLAGAMRE YGEKHDAVFF
IRDAGNVVAS DACLLVGSLY ADAVGLDCGG CGYATCAEML DAQRELNPPA TPFRGPNCIV
RMADLGIAVG SAVKTASLHN VDNRVMYTAG VGALSLGWLE GCGVAYGIPL RASGKDIFFD
RTR
|
|---|
| |