| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1080 |
|---|
| Symbol | |
|---|
| ID | 4847227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1068787 |
|---|
| End bp | 1069281 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640115768 |
|---|
| Product | peptide methionine sulfoxide reductase |
|---|
| Protein accession | YP_001046995 |
|---|
| Protein GI | 126179030 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.197554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCGG AGAAGAGCCT CGAGCGCGCC ACGTTCGGCG CGGGGTGTTT CTGGGGCGTC
GAGGAGGCGT TCCGGCGCGT GCCGGGCGTC GTGGAGACCG CGGTGGGATT CATGGGCGGC
ACCGTCGAGA ACCCGACCTA CCCCGAGGTC TGCACCGGAA GGACCGGGCA CGCCGAGGTC
GTGCAGGTGA CCTACGACCC CGGTACCGTC TCGTACCGGG CGCTCCTCGA CACGTTCTGG
GACGCCCACG ACCCGACCAC CCCGAACCGG CAGGGACCCG ATATCGGGAC GCAGTACCGG
TCGGTGATCT TTGTCCATAC TCCCGAGCAG GAGGCGGAGG CCCGGGCGTC GAAGGAGGAG
ATGGATCAAT CAGGAAAGTT CCGCCGCCCC ATCGTCACCG CGATCGAGCC CGCGGGGACG
TTCTGGCGGG CGGAGGAGTA CCACCAGCAG TACTTCGCGA AACGCGGCGG CGGGCAGTGC
CGGACGGTGT GGTAG
|
|---|
| Protein sequence | MAPEKSLERA TFGAGCFWGV EEAFRRVPGV VETAVGFMGG TVENPTYPEV CTGRTGHAEV
VQVTYDPGTV SYRALLDTFW DAHDPTTPNR QGPDIGTQYR SVIFVHTPEQ EAEARASKEE
MDQSGKFRRP IVTAIEPAGT FWRAEEYHQQ YFAKRGGGQC RTVW
|
|---|
| |