Gene Memar_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1075 
Symbol 
ID4847761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1063547 
End bp1064665 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content66% 
IMG OID640115763 
Productepocide hydrolase domain-containing protein 
Protein accessionYP_001046990 
Protein GI126179025 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.676666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCCT TCACGATCGC CGTTCCGGAG GCTGTCCTCG ACGACCTGCG TCAACGCCTC 
GCCCGCACCC GCTGGCCCGA TGACGGTGGC GGCCGGGGGT ACGGCATCGA TCTCGCATAC
ATGAAAGACC TCGCCCGTTA CTGGGAGCAC TCCTATGACT GGCGGAGGCA CGAGGCGTAC
CTGAACCGCT TCGCCCAGTT CAGGACGGAG GTCGACGGGG TGGGGATTCA TTTCGTCCAC
GAGCGCGGGA GGGGACCGGA CCCGACGCCG CTCCTCCTGC TCCACGGCTG GCCCGACTCG
TTTTATCGGT ATCACCGGGT CATCCCGATG CTTGCCGATC CCGCCCGGTT CGGCGGCGAC
CCCGATCTCT CGTTCGACGT GGTCGTCCCG TCCATCCCCG GACATGGGTT CTCCGACCGA
AAGCCCATGA CCACCGACGA CACTGCCGAT CTCTTCGCGG GACTGATGAC GGAAGAACTG
GGATACGGGA AGTTCGTCGC GGCCGGCGGC GACGCCGGGA CCCTGATCGC CCAGGCCCTC
GCGGAGCGCC ACGCCGACGC CCTGGTCGGC ATCCACCTGA CCGATGTCGG CTACCCGGAC
CAGACGACGG ATTTCTCGAC CCTCACAGAG CCCGAGATGG CGTTCGCGAA CTACATCCGG
GAGTGGTGGA TGAACGAAGG CGCCTTCAAC ATCATCCAGT CGACCAAACC GCAGAGCCTC
GCCTACGGCC TGGCCGATTC GCCCGCAGGC CTCGCGGCCT GGATCATGAG TTTCATGGTC
TCGGGCACGA CCGGTGAGGA GTTTGAGACG CGCATCGGCC GGGACGAACT GCTCACGAAC
ATCACGATCT ACTGGGTTAC CCGGACGATC GGCTCGTCCG TCCGCCGGTA CTACCTTGAC
GCCCACGCGA TCTTGGGCCC CTGGCGGCGC ACCCCGGTTC CGGCTGCCGT CGCCCACCCT
CCCCGGGACG CTCCGCTGCC GCGCGAATGG GCCGAGCGCC GGGTCAACCT CAGGCACTTC
ACCGAACTCC CCCGCGGGGG GCACTTCGCG GCCTGGGAAG AACCCGAACT TTACGCAAAG
GATGTTTTGG ATTTCGTCGG AGAACTGCGC AATTCTTAG
 
Protein sequence
MQPFTIAVPE AVLDDLRQRL ARTRWPDDGG GRGYGIDLAY MKDLARYWEH SYDWRRHEAY 
LNRFAQFRTE VDGVGIHFVH ERGRGPDPTP LLLLHGWPDS FYRYHRVIPM LADPARFGGD
PDLSFDVVVP SIPGHGFSDR KPMTTDDTAD LFAGLMTEEL GYGKFVAAGG DAGTLIAQAL
AERHADALVG IHLTDVGYPD QTTDFSTLTE PEMAFANYIR EWWMNEGAFN IIQSTKPQSL
AYGLADSPAG LAAWIMSFMV SGTTGEEFET RIGRDELLTN ITIYWVTRTI GSSVRRYYLD
AHAILGPWRR TPVPAAVAHP PRDAPLPREW AERRVNLRHF TELPRGGHFA AWEEPELYAK
DVLDFVGELR NS