Gene Memar_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1047 
Symbol 
ID4846433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1032412 
End bp1033230 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content68% 
IMG OID640115735 
Producthypothetical protein 
Protein accessionYP_001046962 
Protein GI126178997 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTCT CTCCTATCGG ACTCGTGCAT TCAGGTATCC GCTTCAGGAG CGACATGCCG 
GTCCAGGGCG TCGACGCCGA GATCGAGATC TTTTCCCGGT ACGCCGGGGG ACTCTCCGGT
ATCGAGGAGA ATTCGCACCT GATCCTCGTC TGCTGGATGC ACGAGGCCGG CCGGGACGTC
CTCACGGCGG TCGCCAGGAA GGTTTCGGGC GATCTCCCGG AGAAAGGCGT CTTCTCCCTC
CGCTCGCCGG TGCGGCCGAA CCCCCTTTCC GTCTCGGTGG TGCGGCTCTG CGGTGTCCGG
GACGAGCGGT TTCTGGCGCT CGCGAACGTC GACCTGATCG ACGGGACGCC GGTGATCGAT
ATCAAGCCCT ACCAGACGGG ATGGGACTGC GTCTTCTCCG CGACCGGCCA CGACCGGACG
GAGAAGATCC GGAAGATGGG CCCCGGCGAG TACCGGGCCG GCCTCATCCG GGAGGCCGTG
AACTATCACG GGGAACTCTG CCCCGGGGTA GCGGTCGGGG TGCGGATCGC GGAGGCGGCG
ACGCGCATCT TTGAGCGCGA CCTGCGGCAC CCGCAGGTAT CGGTCGCGCC CGGCCCCGAT
CCCTGCATCG CCGACGCGCT CATCGGGATC ACCGGCGCGA GCCCCGGAAA CCGCCGGCTG
GGGTGTTCGG GAGGAGACCG GTACGTTCTC TCCTGCGCCG GAAAGGAGGC GGTCTTCATC
CTCCGGGAGG TGCCGGAGAG CGTCGATGCG ATCCTTGCGG CCGGCGAGGC GTCGCTCTTC
GACTGCGCCG TTCATTCCCG GCCGCAACAG AGACGATGA
 
Protein sequence
MELSPIGLVH SGIRFRSDMP VQGVDAEIEI FSRYAGGLSG IEENSHLILV CWMHEAGRDV 
LTAVARKVSG DLPEKGVFSL RSPVRPNPLS VSVVRLCGVR DERFLALANV DLIDGTPVID
IKPYQTGWDC VFSATGHDRT EKIRKMGPGE YRAGLIREAV NYHGELCPGV AVGVRIAEAA
TRIFERDLRH PQVSVAPGPD PCIADALIGI TGASPGNRRL GCSGGDRYVL SCAGKEAVFI
LREVPESVDA ILAAGEASLF DCAVHSRPQQ RR