Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1045 |
Symbol | |
ID | 4846666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1029325 |
End bp | 1031391 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640115733 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_001046960 |
Protein GI | 126178995 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.77936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACA CTAATGGCAA ATTACGTTAC GTTCCCACAA CCTGCCCGTA CTGCGGCGTA GGGTGCGGGC TCAATCTTGT GGTGAATGAA GGTAAGCTCG TGGGGGTCGA GCCCCTGAAG AGAAGTCCGA TCAATGAGGG CAAACTCTGC CCCAAGGGAG CCACCTGCTG GGAGTTCGTG CACAGCCCCG ACCGGCTGAC GAAACCCCTC ATCAAGAAGA ACGGTGAGTT CGTCGAGGCA TCCTGGGACG AGGCTTACGA TCTCATCGCC TCGAAGTTCA AGGAGACCAG CGAGAAGTAC GGGCCGAAAT CCCTTGGATT CCAGGTCTCG TGCCGTACTC CGAACGAAGA GTGCTACATC ATGCAGAAAC TCGCGCGGGT GGCCTTCAAG ACCAACAACA TCGACAACTG CGCGCGTATC TGCCACGGGC CGTCCGTCGC GGGGCTCTCG CTCTCGTTCG GCTCCGGGGC CGCGACGAAC CCCTTCGAGG ACGTCCTGAA CGCCGACGTC ATCTTCATGA TCGGTGCGAA CACGATCGAG GCGCACCCGC TTGCGGGCCG CAGGCTCGTC CAGGCCAAGA AGGCGGGCAA GAAGATCATC GTCTGCGACC CGCGCTACAC ACCCACGGCG CGCCTGGCCG ATGAGTGGGT CCGCTACAAC CCCTCGACCA ACATTGCCCT GATCAACTCG ATCATGTACT GGATCATCCA GGAGAACCTC CACGACAAGG AGTTCATCGA GAAGAGGACG ACGGGATTCG AGGACCTGAA GAAGACCGTG GAGAACTACG CGGACGTCGA GTCGATCACC GGCGTGCCGA CCGAGCGGGT CAAGGAGATC GCCCGGATTT ACGCCGGCGC GAAGAACGCG GTGATCATCT ACTGCCTCGG CATCACGGAG CTCTCGACCG GCACGGACAA CGTCCGGTCG CTCGGAAACC TCTCGATGCT CACCGGCAAC GTGGGCAGAC CCGGAACCGG CGTCAACCCG CTCCGCGGCC AGAACAACGT CCAGGGCGCC TGCGACATGG GTGCATACCC GAACGTCTTC TCCGGCTACC AGAAGTGCGA GGACGACACC ATCCGCAAGC GCATGGAAGA ACTCTGGGGC GTCACCGGGC TTGCAAGCGA GTACGGCGTG ACGCTGACCG AGCAGATCAC CCAGTGCGGC GACCCGATCA AAGCGATGTA TATCTTCGCG TTGAACCCGG TCGTCTCCTA CCCCGACTCG AACCACGTCA TGCGGTCGCT TGAGAAACTC GACTTCCTGG TCGTGCAGGA CATCTTCATG ACCGAGACGG CGAAATACGC CGACGTCATC CTGCCCGGCG CATCCTTCGC CGAGAAGGAC GGGACGTTCA CCAGCGGCGA GCGGCGCATC AACCGTGTAA GGAAGGCCGT GGAGCCTCCG GGCGAGGCGA AGGCCGACTG GGAGATCTTC GTCGATCTCG CTCACAAACT CGGGCTCCAG GGATTCGACT TCAACTCCGC GGAAGATATC TGGGACGACA TGCGGCGGGT CACCCCGTCG ATGGCCGGCG CCTCCTACGC AAGGATGGAG AAGCCGGAGT CCGTGCACTG GCCCTGCCCC ACCGAGGAGC ACCCCGGAAC GCCGATCCTC CACCGCGAGA AGTTCTCGTC GGCCGACGGC CTCGGGCACT TCTTCGGCAT CGAACACCGG CCGCCCGCGG AGGTCGCCGA CGCCGAGTAT CCGTTCACCC TGATGACCGG ACGTCTGCTC TTCCACTACC ACACCCGGAC CCAGACCGGC CGGGCGGAGC TCCTCCACCA CGAGGTGCCC AACGGCTACG TGCAGATCAA CAACGAGGAT GCAGCGCGCC TGAAGATCCA GAACGGCGAG ATGATCAAAC TCACCAGCAG GCGCGGCGAG GTCGAGACCA CCGCGAGGGT GACCGACGAG GTCGCACCGG GCGTGCTGAT GATGGCGATG CACTTTGCGG ATGCGGCGGC GAACATGCTG ACGAACACCG CGCTCGACCC GCTCTCCAAG ATGCCGGAGT TGAAGCACAG TGCTGTGAAG GTCGAGAAGA TCACGGGGGT GCAGTAA
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Protein sequence | MADTNGKLRY VPTTCPYCGV GCGLNLVVNE GKLVGVEPLK RSPINEGKLC PKGATCWEFV HSPDRLTKPL IKKNGEFVEA SWDEAYDLIA SKFKETSEKY GPKSLGFQVS CRTPNEECYI MQKLARVAFK TNNIDNCARI CHGPSVAGLS LSFGSGAATN PFEDVLNADV IFMIGANTIE AHPLAGRRLV QAKKAGKKII VCDPRYTPTA RLADEWVRYN PSTNIALINS IMYWIIQENL HDKEFIEKRT TGFEDLKKTV ENYADVESIT GVPTERVKEI ARIYAGAKNA VIIYCLGITE LSTGTDNVRS LGNLSMLTGN VGRPGTGVNP LRGQNNVQGA CDMGAYPNVF SGYQKCEDDT IRKRMEELWG VTGLASEYGV TLTEQITQCG DPIKAMYIFA LNPVVSYPDS NHVMRSLEKL DFLVVQDIFM TETAKYADVI LPGASFAEKD GTFTSGERRI NRVRKAVEPP GEAKADWEIF VDLAHKLGLQ GFDFNSAEDI WDDMRRVTPS MAGASYARME KPESVHWPCP TEEHPGTPIL HREKFSSADG LGHFFGIEHR PPAEVADAEY PFTLMTGRLL FHYHTRTQTG RAELLHHEVP NGYVQINNED AARLKIQNGE MIKLTSRRGE VETTARVTDE VAPGVLMMAM HFADAAANML TNTALDPLSK MPELKHSAVK VEKITGVQ
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