| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1027 |
|---|
| Symbol | |
|---|
| ID | 4848370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1009176 |
|---|
| End bp | 1009661 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640115714 |
|---|
| Product | methionine sulfoxide reductase B |
|---|
| Protein accession | YP_001046942 |
|---|
| Protein GI | 126178977 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.197554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGGG AAGCCGTAGA AACCGTCGAA ACGGTGAACG TCTGCAACGC CGTGACCGGA
GAGGTGGAAG AGGTCGAGAA GGTCGTCAAG TCCGACGAGG AGTGGCGGCG CCAGCTGACG
CCGGAGCAGT TCTCCGTCGC CCGGAAGGAG GGGACGGAGC CGGCGTTCAC CGGGAAGTAC
TGGGATTGCA AGGAGGACGG GCTGTACGTC TGCGTCTGCT GCGGCAACCA CCTCTTCTCC
TCGAAGACGA AGTTCGAGTC GGGCACGGGC TGGCCGAGTT TCTCCAAGCC CGTCTCGGAC
CTGAACGTCA GGGCGGAACC CGACACCCGG TTCTTCATGA ACCGGACGGA GGTACTCTGT
CGGCGGTGCG ACGCCCACCT GGGCCACGTC TTCGACGACG GGCCGCCGCC GACCCACCAG
CGCTACTGCA TGAACTCGGC ATCGCTCCGG TTCGTGCGGG AGAAGGATCT CGGCCGGCGC
GAATGA
|
|---|
| Protein sequence | MNREAVETVE TVNVCNAVTG EVEEVEKVVK SDEEWRRQLT PEQFSVARKE GTEPAFTGKY
WDCKEDGLYV CVCCGNHLFS SKTKFESGTG WPSFSKPVSD LNVRAEPDTR FFMNRTEVLC
RRCDAHLGHV FDDGPPPTHQ RYCMNSASLR FVREKDLGRR E
|
|---|
| |