Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1017 |
Symbol | |
ID | 4847012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1001189 |
End bp | 1002415 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640115704 |
Product | DNA primase |
Protein accession | YP_001046932 |
Protein GI | 126178967 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000125656 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTCAC CGGATACAAC AAAGTATCTC ATTCATCTTA TCCTGCAGAT CGAGGGGGTG GTCGACAAGC CCGACGTGGT GGGCGCCATC TTCGGCCAGA CCGAGGGGTT GCTCGGCGAA GACCTCGACC TGCGCGATTT ACAGAGAACC GGCCGCGTCG GCCGGATCGA TGTCCAGATC ACCACGAAAC GAGGAGAGAC AAAAGGCGTG ATACTCATCT CGTCTTCACT CGACCGGGCG GAGACCGCGC TCCTCGCCTC GTCGCTCGAA ACGATCGACC GGGTCGGGCC GTGCACGGCG CACGTGAGGG TCGACCGCAT CGAAGACATC CGGGTGACCA AACGGCGCAA GATCGTCGAA CGCGCCAAAG AACTCCTTCT CGAGGACTTC GACGAGGGCT CCATCAACAG CGACGATCTG CTCGACGAGG TCAGGGAAGC CATCAGGATC GAGAAACTCG AGTACCTCGG CGAAGAAAAG GTGCACGCGG GGCCGAACGT CATAGACTCC GACGCCATCA TCATCGTCGA AGGACGGGCC GACGTCATCA ACCTGCTGCG CTACGGGATC AAAAATGCCG TTGCGGTCGA AGGAACCAAC GTTCCGCGCA TCATCATCGA TCTCTGTTCG CAGAAGACCG CGACGACCCT GCTCGACGGC GACCGGGGCG GAGAATTGAT CCTCCGCGAA CTCCTCCAGG TCGCCGAGAT CGACTTCGTG GCCTACAGTC CCCGGGGAAA GAGCGTCGAG GAGATGAGCC GCAAAGAGAT CGTCAAGGCG CTCCGGAACA AAGTGCCTGC AGTGGGGATC ATCGACCAGC CTCCCGCCGA GGAGAACGTC GAGCGGTTGC CTCCGAGTGC GGCCCCCGCC GAGGTGCGGG CTCCTGCCGG TGCCGGAAGG ACAAGCGAAG GCGAGCGGCC GCCACGCCGG GAATGGGATT CAAAGCCCCC CTCGACGCTC GGGGAGCACA TGGCCGACGT CCGGGACAAA AAGATTGCGC GGTTCCTCTC CCCGGATTAC ACCGTCCTCC TGGAATCCAA CGCAACCGAC GTCGAGGGCG CACTCCAGAA CCTGAACGGC GACGTCGAAG GGCTCGTCGT CGATCGGATC ATCGACCAGA AACTCCTCGA TCAACTCGGG GGGAGGGACA TCGAGTTCGT GGCTGCCCGG GACTTTAAGG GGATAATAAA GCGCCCGCTC TCCATCAGGC TCATAAAGAT AGGGTGA
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Protein sequence | MYSPDTTKYL IHLILQIEGV VDKPDVVGAI FGQTEGLLGE DLDLRDLQRT GRVGRIDVQI TTKRGETKGV ILISSSLDRA ETALLASSLE TIDRVGPCTA HVRVDRIEDI RVTKRRKIVE RAKELLLEDF DEGSINSDDL LDEVREAIRI EKLEYLGEEK VHAGPNVIDS DAIIIVEGRA DVINLLRYGI KNAVAVEGTN VPRIIIDLCS QKTATTLLDG DRGGELILRE LLQVAEIDFV AYSPRGKSVE EMSRKEIVKA LRNKVPAVGI IDQPPAEENV ERLPPSAAPA EVRAPAGAGR TSEGERPPRR EWDSKPPSTL GEHMADVRDK KIARFLSPDY TVLLESNATD VEGALQNLNG DVEGLVVDRI IDQKLLDQLG GRDIEFVAAR DFKGIIKRPL SIRLIKIG
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