Gene Memar_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1008 
Symbol 
ID4847947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp995259 
End bp996176 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content59% 
IMG OID640115695 
ProductNADH ubiquinone oxidoreductase, 20 kDa subunit 
Protein accessionYP_001046923 
Protein GI126178958 
COG category[C] Energy production and conversion 
COG ID[COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG CTATTGAAGA ACTGGCAGGA TGTTCAGGGT GTACGATCGC AGTGCTGGAT 
CTCCATGAAA TGCTCCTTGA CGTCATCGCA GAAGCGGACA TCGTCTACTC CCCGGTGATC
ATGGACGTCA AGGAGCCTCC CGAGGATATC GATATCGCGT TCGTGACCGG AGCCGTTCGG
AACGAAGAGA ACCGCGAACG CCTCGAGAAG ATCCGGAAAC GGTCAAAGAC GCTTATCGCA
CTAGGGACCT GCGCCTGCTA CGGGGGCGTA TCGGGTCTCT CAATGCTGAG CTCGAACGAA
GACCTCTTCT CCTGCGTCTA CCGGGAGGTT GAGACGACGA AGCCCGACGG GGTTATCCCG
ACGGACGTGC CGCCGTTCCT CTACCGGGCG TTCGCGGTGG GCGACCTCGT GAAGATCGAT
TACTACATCG TGGGCTGCCC GCCGAAAGAG GCGTTCTTAA AGCAGATCAT CCCGGCAATG
ATCGCGGGAG ACACCCTCGA ACTCTCGCGC AAGTCCGTCT GTTCGGAATG CGACAGGATC
ATGGGACCGG TCGAGAGCTG GACGCTCAAG CATCGGCACG AGGGCGTTCC CGACCGCGAA
CACTGCCTGC TCGGGCAGGG CTACCTCTGC CTCGGGAGCG TCACCTTCGG GAGATGCGGT
GCGTCGTGCC CCAAAAACAA CATCCCGTGC CACGGGTGCA ACGGCCCCTC GCTCGATATC
CTCCGTGAGC CCTGCCGGGA CATCTACGGC ATGATGGCGC GGAGAATTTC GGATCTCACC
GGTAAGCCGC AGAAAGAGGT GGAGAAGGAA CTCTACGACG TCGCACACAC GATGTACGCC
TTCACTATCG GGAGCCTGAT CATGGAGGAC AAGGAGAACT CAAAGATCCG GGATCTGGTA
AAGGAGAGGA GCAGATGA
 
Protein sequence
MKIAIEELAG CSGCTIAVLD LHEMLLDVIA EADIVYSPVI MDVKEPPEDI DIAFVTGAVR 
NEENRERLEK IRKRSKTLIA LGTCACYGGV SGLSMLSSNE DLFSCVYREV ETTKPDGVIP
TDVPPFLYRA FAVGDLVKID YYIVGCPPKE AFLKQIIPAM IAGDTLELSR KSVCSECDRI
MGPVESWTLK HRHEGVPDRE HCLLGQGYLC LGSVTFGRCG ASCPKNNIPC HGCNGPSLDI
LREPCRDIYG MMARRISDLT GKPQKEVEKE LYDVAHTMYA FTIGSLIMED KENSKIRDLV
KERSR