Gene Memar_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0994 
Symbol 
ID4847582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp979804 
End bp981063 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content62% 
IMG OID640115681 
Productglycine betaine/L-proline ABC transporter, ATPase subunit 
Protein accessionYP_001046909 
Protein GI126178944 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4175] ABC-type proline/glycine betaine transport system, ATPase component 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0684167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCTGG AGGGGTCCGT CATTTTTGAG GAGATACCCA TAGAGTACAC AAGATCATTA 
CAACCAATAA TCAGCGTCAG GGACCTGACC AAGGTATTTG GGCAGGACCC GGAAAAGGCA
CTGGAACTCC ATAGAACAGG CCGCTCGAAA CAGGAGATCT ACGAGGAGAC CGGCTCGACG
CTGGCCCTCG ATGACGTCTC GTTCGACGTC ATGCCGGGCG AGACGTTCGT CCTGATGGGG
CTGTCCGGGA GCGGGAAATC GACGCTCCTG CGCTGCATCA ACCGAATCAT CGACCCCACC
GAGGGCGAAA TACTGATCGG CGGCGAGGAC ATCGTCGGCA TGGGCCATGA AGAACTCCGG
ACGACCCGGC GACGCAAACT CGGGATGATC TTCCAGGGTT TCGCTCTCCT CCCCCATCGA
ACGGTTCTCG ACAACGTCGC TTTCGGCCTC GAGATCCAGG GCGTCCCGGC GGAAGAACGG
CACGCGAAAG CCGAGGAAGT GCTCCAGATG GTGGGGCTCG GGGGCTACGG GGCGAGCATG
CCCGGGGAGC TCTCCGGCGG CATGAAGCAG CGTGTCGGGC TCGCCCGCGC GCTCACCAGC
GACCCGGATG TACTCCTGAT GGACGAGGCG TTCAGCGCTC TCGACCCCCT TATCCGCAGG
GACATGCAGG ACGAACTGCT GGACCTCCAG CAGCGGCTCG GCAAGACAAT CATCTTCGTC
ACCCACGACC TCGACGAGGC CCTGAAACTC GGCGACCGGA TCGCCCTGAT GAAGGACGGC
GCAATCGTGC AGATCGGCAC GCCGGAGGAG ATCCTGACGA ACCCCGAGAA CGCCTACGTC
GAGAAGTTCG TCGCCGACGT CGACCTCACG AGGGTTCTCT CGGCAAGCGA CGTGATGCGG
CGCCCCGAGC CGGTCGCCCA GTGCACCGCG GGCCCGAGGG TGGCCCTGCA CCTCATGGAG
GAGCACGATA TTACAGGGGT ATTCGTGGTC ACCCGTCAGC GCCTGCTCAG GGGCCTGGTG
ACGCTCGAAG CTGCTGCCGG AGCCGTCAAG AAGGGCAAGG AATTACAGGA AGTGCTCATC
ACCGACGTTC CCGTCGTGGC TCCCGATGCA TCGCTTTCCG ACATCATCTC GCTGATCGTC
GAGAGCCCCT ATCCTGTGGC GGTGGTGGAC GATACCGGCA GGCTCAGGGG TGTCATATCG
CGTGGCGCCA TCCTTGCTGC TCTGGCACGA AAGGGGGAGG ATATCAATGC AACTTCCTAA
 
Protein sequence
MKLEGSVIFE EIPIEYTRSL QPIISVRDLT KVFGQDPEKA LELHRTGRSK QEIYEETGST 
LALDDVSFDV MPGETFVLMG LSGSGKSTLL RCINRIIDPT EGEILIGGED IVGMGHEELR
TTRRRKLGMI FQGFALLPHR TVLDNVAFGL EIQGVPAEER HAKAEEVLQM VGLGGYGASM
PGELSGGMKQ RVGLARALTS DPDVLLMDEA FSALDPLIRR DMQDELLDLQ QRLGKTIIFV
THDLDEALKL GDRIALMKDG AIVQIGTPEE ILTNPENAYV EKFVADVDLT RVLSASDVMR
RPEPVAQCTA GPRVALHLME EHDITGVFVV TRQRLLRGLV TLEAAAGAVK KGKELQEVLI
TDVPVVAPDA SLSDIISLIV ESPYPVAVVD DTGRLRGVIS RGAILAALAR KGEDINATS