Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0994 |
Symbol | |
ID | 4847582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 979804 |
End bp | 981063 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640115681 |
Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
Protein accession | YP_001046909 |
Protein GI | 126178944 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0684167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCTGG AGGGGTCCGT CATTTTTGAG GAGATACCCA TAGAGTACAC AAGATCATTA CAACCAATAA TCAGCGTCAG GGACCTGACC AAGGTATTTG GGCAGGACCC GGAAAAGGCA CTGGAACTCC ATAGAACAGG CCGCTCGAAA CAGGAGATCT ACGAGGAGAC CGGCTCGACG CTGGCCCTCG ATGACGTCTC GTTCGACGTC ATGCCGGGCG AGACGTTCGT CCTGATGGGG CTGTCCGGGA GCGGGAAATC GACGCTCCTG CGCTGCATCA ACCGAATCAT CGACCCCACC GAGGGCGAAA TACTGATCGG CGGCGAGGAC ATCGTCGGCA TGGGCCATGA AGAACTCCGG ACGACCCGGC GACGCAAACT CGGGATGATC TTCCAGGGTT TCGCTCTCCT CCCCCATCGA ACGGTTCTCG ACAACGTCGC TTTCGGCCTC GAGATCCAGG GCGTCCCGGC GGAAGAACGG CACGCGAAAG CCGAGGAAGT GCTCCAGATG GTGGGGCTCG GGGGCTACGG GGCGAGCATG CCCGGGGAGC TCTCCGGCGG CATGAAGCAG CGTGTCGGGC TCGCCCGCGC GCTCACCAGC GACCCGGATG TACTCCTGAT GGACGAGGCG TTCAGCGCTC TCGACCCCCT TATCCGCAGG GACATGCAGG ACGAACTGCT GGACCTCCAG CAGCGGCTCG GCAAGACAAT CATCTTCGTC ACCCACGACC TCGACGAGGC CCTGAAACTC GGCGACCGGA TCGCCCTGAT GAAGGACGGC GCAATCGTGC AGATCGGCAC GCCGGAGGAG ATCCTGACGA ACCCCGAGAA CGCCTACGTC GAGAAGTTCG TCGCCGACGT CGACCTCACG AGGGTTCTCT CGGCAAGCGA CGTGATGCGG CGCCCCGAGC CGGTCGCCCA GTGCACCGCG GGCCCGAGGG TGGCCCTGCA CCTCATGGAG GAGCACGATA TTACAGGGGT ATTCGTGGTC ACCCGTCAGC GCCTGCTCAG GGGCCTGGTG ACGCTCGAAG CTGCTGCCGG AGCCGTCAAG AAGGGCAAGG AATTACAGGA AGTGCTCATC ACCGACGTTC CCGTCGTGGC TCCCGATGCA TCGCTTTCCG ACATCATCTC GCTGATCGTC GAGAGCCCCT ATCCTGTGGC GGTGGTGGAC GATACCGGCA GGCTCAGGGG TGTCATATCG CGTGGCGCCA TCCTTGCTGC TCTGGCACGA AAGGGGGAGG ATATCAATGC AACTTCCTAA
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Protein sequence | MKLEGSVIFE EIPIEYTRSL QPIISVRDLT KVFGQDPEKA LELHRTGRSK QEIYEETGST LALDDVSFDV MPGETFVLMG LSGSGKSTLL RCINRIIDPT EGEILIGGED IVGMGHEELR TTRRRKLGMI FQGFALLPHR TVLDNVAFGL EIQGVPAEER HAKAEEVLQM VGLGGYGASM PGELSGGMKQ RVGLARALTS DPDVLLMDEA FSALDPLIRR DMQDELLDLQ QRLGKTIIFV THDLDEALKL GDRIALMKDG AIVQIGTPEE ILTNPENAYV EKFVADVDLT RVLSASDVMR RPEPVAQCTA GPRVALHLME EHDITGVFVV TRQRLLRGLV TLEAAAGAVK KGKELQEVLI TDVPVVAPDA SLSDIISLIV ESPYPVAVVD DTGRLRGVIS RGAILAALAR KGEDINATS
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