| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0985 |
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| Symbol | |
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| ID | 4847817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 968683 |
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| End bp | 970326 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640115672 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001046900 |
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| Protein GI | 126178935 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.156151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGAGTG AGACGGTTAA GAAAGGCTAC CAGCGTGCTC CGAACCGGGC GTTGCTCCGG
TCGCTCGGCG TCACCGACCG TGAGATGGAT CTGCCCTTCA TCGGGATAGC GAACGCGTAC
AACAACATCG TCCCCGGGCA CCTCCACCTC CGGTCGATCT CGCAGAAGGT GCAGGAGGGG
GTCGCGGCCG CGGGCGCCGT ACCGTTCGAG TTCGGAACCA TCGGCATCTG CGACGGGATC
GCGATGGGGC ACGAAGGGAT GCGGTATTCC CTCCCCTCGC GGGAGAACAT TGCCGACGCC
GTCGAACTGA TGGTCGAGGC GCACCGGTTC GACGGCCTGG TCTGCGTCTG CACCTGCGAC
AAGATCGTTC CCGGCATGCT CATGGCGGCG GTGCGGTGCA ACATCCCGGC GATCGTTGTC
ACCGGCGGCC CCATGCTCCC CGGCTATGCG GCGGGCCGCG AACTCTCCCT CATCGATGTC
TTCGAGGGTG TGGGTCGCGT CGCCGCCGGC ACGATGAGCG AGGAGGAGCT CGGCGAGCTC
GAGTGCGCGG CGATGCCCGG GTGCGGGAGT TGCCAGGGGC TCTATACCGC AAACACCATG
GCGTGCGTGA CCGAGGCGCT GGGCCTCTCC CTTCCGGGAT GTGCGGCAAT CCCTGCCGTC
GACGCCGCAA AACTCCGCAT TGCCCGGGAG AGCGGGGAGC GGGTGGTCGG CCTTGTCCGG
GAGGGCGTCC GCCCGCGGGA TCTCGTCACC CCAAAAAGCC TCGCGAACGC GATAAGGGTG
GATATGGCGC TCGGCGGGTC GTCGAACACC GTTCTTCACC TGATGGCCGT CGCACGGGAG
GCGGCGGTCC CCCTGGATCT CGAAGCCTTC AACGCCGTCG CCGAGGTGAC CCCGCACATC
TGCCACATGA TGCCCGGGGG CCCGCACTCG ATGCTTGCCC TCTACCGGGC GGGAGGCATC
CCCGCGGTCT TAAAGATGCT CGAGCGTCAC CTCGACGATG CCCCGACGGT CTCGGGCCGC
TCGATCCTCG AGATCGCAAA AGGCGCGCGG GTCGCCGACC CGGACGTGAT CAGGACGACC
GACGCCCCGG TCAGCCCCGC CGGCGGCCTG AAGATCGTGC GGGGATCGCT CGCCCCCGAC
GGCGCCGTCG TCAAATGCGC CGCCGTCCCG GAGGCGATGT GGCGGCACAG GGGGCCGGCA
CGGGTCTTCG ACGGTGAAGG TGCCGCGATG GAAGCGATCC TGCACCGCGA GATCGCGGAA
GGCGACGTCC TCGTTATCCG CTACGAGGGG CCGCGGGGAG GGCCCGGGAT GCCCGAGATG
CTCTCGCCGA CATCGGCGCT GATGGGTCTT GGCTACGCCC GGGTCGCCCT GGTGACGGAC
GGACGCTTCT CGGGCGGCAC CCGGGGGCCG TGCATCGGGC ACATCGCCCC AGAGGCCGCA
GTCGGCGGGC CGATCGCCCT CGTGGAGGAC GGCGACGAGA TCGTAATCGA CCTCTACGCG
AAAAGCCTCG ATCTCGCCGT GGAGAGAGCG ACCCTCGAGG AGCGGCGGAA GACCTGGAAA
CCGCCGGCAC GCCGGCTTAC CGGTATGCTC GCCCGCTACG TGCAGACCGT CGAGCAGGCA
AACCTCGGCG CCGTCCAGAG GTAA
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| Protein sequence | MRSETVKKGY QRAPNRALLR SLGVTDREMD LPFIGIANAY NNIVPGHLHL RSISQKVQEG
VAAAGAVPFE FGTIGICDGI AMGHEGMRYS LPSRENIADA VELMVEAHRF DGLVCVCTCD
KIVPGMLMAA VRCNIPAIVV TGGPMLPGYA AGRELSLIDV FEGVGRVAAG TMSEEELGEL
ECAAMPGCGS CQGLYTANTM ACVTEALGLS LPGCAAIPAV DAAKLRIARE SGERVVGLVR
EGVRPRDLVT PKSLANAIRV DMALGGSSNT VLHLMAVARE AAVPLDLEAF NAVAEVTPHI
CHMMPGGPHS MLALYRAGGI PAVLKMLERH LDDAPTVSGR SILEIAKGAR VADPDVIRTT
DAPVSPAGGL KIVRGSLAPD GAVVKCAAVP EAMWRHRGPA RVFDGEGAAM EAILHREIAE
GDVLVIRYEG PRGGPGMPEM LSPTSALMGL GYARVALVTD GRFSGGTRGP CIGHIAPEAA
VGGPIALVED GDEIVIDLYA KSLDLAVERA TLEERRKTWK PPARRLTGML ARYVQTVEQA
NLGAVQR
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