Gene Memar_0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0937 
Symbol 
ID4847051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp917244 
End bp918269 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID640115623 
Productputative translation factor pelota 
Protein accessionYP_001046852 
Protein GI126178887 
COG category[R] General function prediction only 
COG ID[COG1537] Predicted RNA-binding proteins 
TIGRFAM ID[TIGR00111] probable translation factor pelota 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0307408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCCG AAGTCCGGGA GATGAAGAGA CAGTTCGGCG AGATACGTCT CTTCCCGGAG 
ACGCTCGACG ACCTCTGGCA CCTCTCCCAC CTGGTTGGGC CCGGGGATCT CGTCTTTGCG
ACGACCTTTC GGAGCGTGGA GGCGGCGACC GACAAACTCC GGCCGGAGAA GGTCGAGAAA
CGGCCGGTGC GGCTTGGGAT TTGGGTTGAG AAGGTGGAGT TCCACCAGCA CACGAACCGT
CTCCGGATCG CCGGCATCAT CGAGAGCGGG GTGGACGTTG CCGCACACCA CACCCTGAAC
GTCGAAGCCG GGTTCGAGAT CTCGGTTGTC AAACGCTGGC GGCCCGTCGA CTGTGAGCGG
ATCCGGCGCG CGGTCGACGC CTCCGCGTAC GGCGTGGTTC ACGTCGTGAG CGTCGAGGAA
GGAGAGGCGC AGATCTACCG GCTGCGCCAG TTCGGCCCGG AGTGGGTGAC GACCGTCACG
GCCGGGAGCA GCAAGGGTGC CGATACCGGC ACCCGGTCGG CGCTTTTTGA GAAAACGCTT
GACACGGTCG CCGCGGTCAC CGGGCCTCTC GTCGTCGCGG GCCCGGGGTT CGTGAAGGAC
GAGTTTGCGG AGTACGTGAA GGTCCGGGCC CCCGACCTCG CCGGGCGGAT GGTCGCCGTC
GAGACCCGTC GCATCGGGCG GGGCGCCGTG CAGGAGGTCA TCGGACAGGG GATTCTTGAC
CGGCTGCTCG GCGACCTCCA CCTCGCACGG GAGGTCGCGC TGATGGACGA GGTCCTGGTC
AGGATCGCGA CCGAGGGCGC CGTCGCCTAC GGTATCGACG AGGTCCGCAA AGCGGTTGCC
TACGGTGCGG CGGAGACGGT GCTGGTCGCC GACACCCTGC TCCGCGACGA TGAGGCTACG
GGCGTCATCG AGCAGGCCGA GCGCGTCAAC GCAACGGTCG TGGTGCTGAG CACTGAGTTC
GAGCCCGGGG AGCGCCTTGA TGCCATCGGG GGCGCCGCGG CGCTTTTGCG GTATAAGATC
GAGTGA
 
Protein sequence
MKAEVREMKR QFGEIRLFPE TLDDLWHLSH LVGPGDLVFA TTFRSVEAAT DKLRPEKVEK 
RPVRLGIWVE KVEFHQHTNR LRIAGIIESG VDVAAHHTLN VEAGFEISVV KRWRPVDCER
IRRAVDASAY GVVHVVSVEE GEAQIYRLRQ FGPEWVTTVT AGSSKGADTG TRSALFEKTL
DTVAAVTGPL VVAGPGFVKD EFAEYVKVRA PDLAGRMVAV ETRRIGRGAV QEVIGQGILD
RLLGDLHLAR EVALMDEVLV RIATEGAVAY GIDEVRKAVA YGAAETVLVA DTLLRDDEAT
GVIEQAERVN ATVVVLSTEF EPGERLDAIG GAAALLRYKI E