Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0937 |
Symbol | |
ID | 4847051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 917244 |
End bp | 918269 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640115623 |
Product | putative translation factor pelota |
Protein accession | YP_001046852 |
Protein GI | 126178887 |
COG category | [R] General function prediction only |
COG ID | [COG1537] Predicted RNA-binding proteins |
TIGRFAM ID | [TIGR00111] probable translation factor pelota |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0307408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCCG AAGTCCGGGA GATGAAGAGA CAGTTCGGCG AGATACGTCT CTTCCCGGAG ACGCTCGACG ACCTCTGGCA CCTCTCCCAC CTGGTTGGGC CCGGGGATCT CGTCTTTGCG ACGACCTTTC GGAGCGTGGA GGCGGCGACC GACAAACTCC GGCCGGAGAA GGTCGAGAAA CGGCCGGTGC GGCTTGGGAT TTGGGTTGAG AAGGTGGAGT TCCACCAGCA CACGAACCGT CTCCGGATCG CCGGCATCAT CGAGAGCGGG GTGGACGTTG CCGCACACCA CACCCTGAAC GTCGAAGCCG GGTTCGAGAT CTCGGTTGTC AAACGCTGGC GGCCCGTCGA CTGTGAGCGG ATCCGGCGCG CGGTCGACGC CTCCGCGTAC GGCGTGGTTC ACGTCGTGAG CGTCGAGGAA GGAGAGGCGC AGATCTACCG GCTGCGCCAG TTCGGCCCGG AGTGGGTGAC GACCGTCACG GCCGGGAGCA GCAAGGGTGC CGATACCGGC ACCCGGTCGG CGCTTTTTGA GAAAACGCTT GACACGGTCG CCGCGGTCAC CGGGCCTCTC GTCGTCGCGG GCCCGGGGTT CGTGAAGGAC GAGTTTGCGG AGTACGTGAA GGTCCGGGCC CCCGACCTCG CCGGGCGGAT GGTCGCCGTC GAGACCCGTC GCATCGGGCG GGGCGCCGTG CAGGAGGTCA TCGGACAGGG GATTCTTGAC CGGCTGCTCG GCGACCTCCA CCTCGCACGG GAGGTCGCGC TGATGGACGA GGTCCTGGTC AGGATCGCGA CCGAGGGCGC CGTCGCCTAC GGTATCGACG AGGTCCGCAA AGCGGTTGCC TACGGTGCGG CGGAGACGGT GCTGGTCGCC GACACCCTGC TCCGCGACGA TGAGGCTACG GGCGTCATCG AGCAGGCCGA GCGCGTCAAC GCAACGGTCG TGGTGCTGAG CACTGAGTTC GAGCCCGGGG AGCGCCTTGA TGCCATCGGG GGCGCCGCGG CGCTTTTGCG GTATAAGATC GAGTGA
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Protein sequence | MKAEVREMKR QFGEIRLFPE TLDDLWHLSH LVGPGDLVFA TTFRSVEAAT DKLRPEKVEK RPVRLGIWVE KVEFHQHTNR LRIAGIIESG VDVAAHHTLN VEAGFEISVV KRWRPVDCER IRRAVDASAY GVVHVVSVEE GEAQIYRLRQ FGPEWVTTVT AGSSKGADTG TRSALFEKTL DTVAAVTGPL VVAGPGFVKD EFAEYVKVRA PDLAGRMVAV ETRRIGRGAV QEVIGQGILD RLLGDLHLAR EVALMDEVLV RIATEGAVAY GIDEVRKAVA YGAAETVLVA DTLLRDDEAT GVIEQAERVN ATVVVLSTEF EPGERLDAIG GAAALLRYKI E
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