Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0936 |
Symbol | |
ID | 4847987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 915349 |
End bp | 917247 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640115622 |
Product | hypothetical protein |
Protein accession | YP_001046851 |
Protein GI | 126178886 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0251474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAC TACAGGGAAT GAGCGGGGTC GATCTTCGTG CGCTGGTAGC GGAAGCTGCC GATCGCCTCC CGCTCTGGGT CGGCAAGATC TACCAGTTCG ACGCGAAGAC CCTCGGCATC AGGCTGAACG GTGAAGATCG GGCGAAGTAC CTGTTCCTCA TCGAGACGGG ACGGCGCGCC CACTTCACCG CAGAGTTTCC TGTGCCTCCA AAGAACCCGC CGAGTTTCGC GATGCTGCTC CGGAAGCACC TCGAGGGCGG GAAGGTGCTC GGTATCCGCC AGCTCGGGCT CGAGCGCACG ATGAGCCTCG ACATCGGGAA GCGGGATACG ACCTACCACC TCATCTTCGA GCTCTTCGAC GAGGGGAACG CCGTCCTCTG CGACGAAGGC TACACGATCA TCAAACCCCT CTGGCACCAC CGGTTCAAGA CCCGGGAGGT GGTCCCGGGC GCGGTCTACG CCTTCGAAGG GTCCGACTGC TCGTCTCTCT CGCCGGAGGC GTTCGGGTCG ATGCTTGCAG AGTCCGACCG CGACATCGTC CGGACGCTCG CCGTCGGGTG CATGCTCGGC GGCGCGTATG CCGAAGAGGT CTGCAGGATC GTGGGCGTCG AGAAGAGCGC TGCCGCCGCG GAGGTGGACG CGGAGGCGGT TCGGGAGGCG CTCGAACGGC TGATGGCCGA CGTCGGGCAG CGCCGTGAAC CGGTGATAAC GGCGTCCGGG TGCTGGCCGG TGGTGCTTGC CGGTGACGAG GTTCGCGAGC GGTTTGCGAC CTTCAGCGAG GCGCTGGATG CCTTCTACCC GAAGACGGTG GGCGGAAAGG AGGAGGCCGC GGCCGGGAAG CCCCGCCTCT CCCAGGCGGA GGTGATCCGA CGGCGGCAGG CGGAGGCGAT CAAAGGGTTC GAGAAGAAGA TCGAGCGTAA TCAGCGGATC GTGGAGGTGA TCTACGAGAA CTACACTGCT GTTGCCGGGA TCATAGCGAC GCTCGATGAG GCGAGCAAAA ACCGGTCGTG GCAGGAGATC GAGAAAATCC TCAAAGAGAA CGGCGATAAC CCTGCGGCAA AGATGGTCCG TGCGATTCAC CCCGCGGACG CGGCGGTTGA CGTCGATCTC TCGGGGGAAC GGGTGAAGAT CTATGTCCAC GAGACGATCG AGCAGAACCT CGGCCGCTAC TACGACCAGA TCAAGAAGTT CAAGAAGAAG AAGACGGGCG CGCTCGCGGC CATGGAGCGG ACGGTTCCCG AGAAGCCCCG GACGAAGCGG AACCTTCCCC TCCAGAAAAA GCGGTGGTAT CACCGCTTCC GCTGGTTCAC CACCAGCGAC GGCACCCTTG TCATCGGCGG CCGGGACGCC TCCCAGAACG AGGAACTCGT CAAGAAGTAC ATGGAAGGCG GCGACCTCTT CGTCCACGCC GACGTCCACG GCGGGAGCGT CGTCATCGTG AAGGGCACGA CTGAACACAT GGACGAGGCC GTGCGGTTCG CCGCGTCCTA CTCCAACGCC TGGAAGGCCG GGCACTTCAC GGCGGACGTC TACGCCGCCC GGCCCGACCA GGTGAGCAAG ACGGCCGAGT CCGGCGAGTA CGTGGCGAGA GGCGCCTTCA TCGTCCGGGG CGAGCGGCAA TACTTCAGGA ACGCGCCCCT GGGCGTGGCG ATCGGCCTTC AGATGGCGCC TGAGGTCGCC GTCATCGGTG GCCCGCCCGG TGCCGTCACC GGGCGTACGA AAGTGTGGGT GGAACTCCGT CCCGGGCAGT TCGAACCGAA CGACACCGCA AGGAAGGTGG TCCGGGCACT CAGGGAGAAA CTCTCGGAGG ACGAGTGGAA AGGGCTCAAG AACGCCCTGA ACACCGAGGC GGTCGCCGCA TTCGTCCCGC CGGGGGGCTC CGACATCGTG GAATCATGA
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Protein sequence | MATLQGMSGV DLRALVAEAA DRLPLWVGKI YQFDAKTLGI RLNGEDRAKY LFLIETGRRA HFTAEFPVPP KNPPSFAMLL RKHLEGGKVL GIRQLGLERT MSLDIGKRDT TYHLIFELFD EGNAVLCDEG YTIIKPLWHH RFKTREVVPG AVYAFEGSDC SSLSPEAFGS MLAESDRDIV RTLAVGCMLG GAYAEEVCRI VGVEKSAAAA EVDAEAVREA LERLMADVGQ RREPVITASG CWPVVLAGDE VRERFATFSE ALDAFYPKTV GGKEEAAAGK PRLSQAEVIR RRQAEAIKGF EKKIERNQRI VEVIYENYTA VAGIIATLDE ASKNRSWQEI EKILKENGDN PAAKMVRAIH PADAAVDVDL SGERVKIYVH ETIEQNLGRY YDQIKKFKKK KTGALAAMER TVPEKPRTKR NLPLQKKRWY HRFRWFTTSD GTLVIGGRDA SQNEELVKKY MEGGDLFVHA DVHGGSVVIV KGTTEHMDEA VRFAASYSNA WKAGHFTADV YAARPDQVSK TAESGEYVAR GAFIVRGERQ YFRNAPLGVA IGLQMAPEVA VIGGPPGAVT GRTKVWVELR PGQFEPNDTA RKVVRALREK LSEDEWKGLK NALNTEAVAA FVPPGGSDIV ES
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