| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0912 |
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| Symbol | |
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| ID | 4846529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 891385 |
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| End bp | 894096 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640115598 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001046827 |
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| Protein GI | 126178862 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.644945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAACG TTAATTGCAA ACGTATCCCA AAACTCTCCT ACGGACAGAA TCCTATTCCA
TTCAAGCGTT CTACTCAGAA CATCGCCGGA GCAGCCTGCC ATAAAGGCCG GCACCGGGAG
CGACAGAGAG GAAAAGCTGC TCCGGGCCGC CGATGCAAGC TCCCCGCGGC ACCGGTCCGC
TCGACGACAC GTCTTCCGAA GGAGGAACAA ATTTTGACAC GCGATTACGA AGCACTCGAG
AAGATGGCCG AAACGACCCA GTACCTGGAG AACCTGATCA CCTACGCCAA TGCCCCCATC
ATCGTCTGGG ATGCGAGTCT CAGGATCACC AGGTTCAACA ACGCCTTCGA ACGGTTGACG
GGACGGGCCG CGGACGAGGT CATCGGCCGG TCGCCGGAGA TCCTCTTCCC CGAAACCCGG
CGGGAAGAAC TGATGGATCT CATCCGGAAG ACGACGGCAG GGGAGCGGTG GGAGACCGTC
GAGATTCCCA TACTCACGGC GGACGGCAGG ATCAGGACGG TTCTCTGGAA CTCTGCCGCC
GTGTACGGGG ACGATCGGAA AACGGTCTCC TCGGTCATCG CCCAGGGCCA GGACATCACC
GAGCGCAAAC GGGCCGAAGA GGCGCTTAAG AGAGCGCACG ACGAGCAGGA GATGCGTGTC
AGGGAACGCA CCCTCGAGAT CCGGGCGGCC AACGAGGCCC TGCAGGCCGA GATCACGGAG
CGCACCCGGG CGGAGGAGGC GGTGAAGGCC GAGCGAAAGC GGCTCTACGA CGTCCTCGAG
ATGCTGCCGG TATACGTGGT ACTCCTCTCA CCGGACTATC ACGTGCCTTT CGCAAACCGC
TTCTTCCGGG AGCAGTTCGG CGAGTCCGAC GGTCGGCGCT GCTTCGATTA CCTCTTCTCG
CGCTCGGAGC CCTGTGAGAA CTGCGAGTCT TACCGCGTCA TGAAGACGGG AGCGCCCCAC
CACTGGGAGT GGACCGGCCC GGACGGCCGC GATTACGATA TCTTCGACTT CCCCTTCACC
GAAGCGGACG GCTCCCCCCA CATCCTGGAG GTCGGCATCG ACATCACCAA ACGCAAGCGT
GCCGAGGAGG CGCTGCAACG GCTGAACGAG ACACTTGAAG AGCGCGTGAT CGAACGTACG
GACGAACTTG CGAAGGCCAA TGCCATCCTC AACGCCATCT GCGAGAATAC GCCGGCACCC
ATCTACGTCA CCGATCGCCA AAGCCGTCTC GTGATGTGCA ACCCCGCTGT GCTTCGGACA
CTCGGCAGAT CGCACCCCGA AGTGCTCGGG AAGTCGAAGG CCGAACTCCT CGGCCCGGAG
GTCGGCGGAC CCGTCGTAGC CAATGAGCAG CGCGTTATGG AGACCGGGAT CACCGAGACC
TTCGAGGAAG AGATCGGGCA CCGGATCTAC TACTCGACCA AGACCCCCCT CAGGAATCTG
CAGGGCGACG TCACCGGAGC CATCGCCGTC GGAACGGAGA TAACAGAACT GAAGCGGGTT
GAAGCACAGA GGCAGAAACT CCTGGAACAG CTGCAGCAGT CGGCCGAAGA GATGGAGGTC
CAGAACGAAG AACTGCAGTG CACCACCGAG CAGTTGCAGG AGAAGACCGA GGAACTGGCG
CTTCTCAACC GGGCCCTGCA GGAGAGCGAG GAGCACTTCC GTTCTCTCAT CGAGAACGCA
TCCGATATCA TCCTCCTCCT CGATATGCAG GGACGCATCA CTTACGCGAG TCCTTCGGTG
AGGCAGATCG GGGGCTACGA GCCCGACAAC CTCATCGGCA CGGACGTGCT CGACCTCATA
CACCCCGAAG ACGCCCCAAA GGCCATAGAA GCCGTGAGAA CCGGAGTGGC CCGGCCATCT
ACGAGCCTCA CGTTCGAGGT CCGGGTCAGG GATGCTACCG GCCGGTGGAT CATCCTCGAC
GTTACGGGTG CGAGCCTGAT CCGGGAGGGG AGCGACCGGC GTTTCATCGT GAACGCACGC
GACGTCACCG ACCGAAAACA CGCCGAGGAG GAGCGCAATA GGCTGATCAC CGGTCTCGAG
GCGGCGCACC GGGAGGCGAA CCTCTACCTC GACATCATCA CCCACGACAT CAGGAACGCA
AACAACGTCT CGAGCATCTA CGCCGACCTC ATGCTCGAAC TGCTCGAAGG GGCCGAGAGA
ACCTACGCCC GGAAACTCCG CGACAGCATC TCGCGGAGCA CCGAGATCCT CATGAACGTC
TCGACAATCA GGCGGATTCA CGCCTGTTCG ACGGGATTCT CGCCGGTCGA CCTCAACGCG
GTCGTCAGTG AGGAAGCCGG AAACTTCCGT GGAGCATCGA TACGCCGGGA GATCCCACCG
CTCGAGGTCC AGGCGGACAA CCTCCTCTCT ACAGTCTTTA TGAACCTCAT CGGCAACAGC
GTCAAGTTCG GCGGACCGGG TGTGGAGATC GTCGTCCGGG CGGAGGAGCG GGACGGAGAA
GTGCTGGTGA CGGTCGAGGA CAACGGGCCC GGCGTGCCCG ACGACGTGAA GAAGAAGCTC
TTCCACCGGT TCGAGCGGGG GAAGGCCCGG GGAAGGGGCG ACGGGCTCGG GCTCTTCATC
TGCAGGACGG TTACCGAGCG CTACGGGGGG AGGATCTGGA TCGAGGACCG CGTGCCCGGC
CGTCCGGAAG AAGGGGCGGC ATTCAGGTTC ACGCTCAAAC CGGCAAAGCG GGATCGAGAC
CCCGGCTCAT GA
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| Protein sequence | MPNVNCKRIP KLSYGQNPIP FKRSTQNIAG AACHKGRHRE RQRGKAAPGR RCKLPAAPVR
STTRLPKEEQ ILTRDYEALE KMAETTQYLE NLITYANAPI IVWDASLRIT RFNNAFERLT
GRAADEVIGR SPEILFPETR REELMDLIRK TTAGERWETV EIPILTADGR IRTVLWNSAA
VYGDDRKTVS SVIAQGQDIT ERKRAEEALK RAHDEQEMRV RERTLEIRAA NEALQAEITE
RTRAEEAVKA ERKRLYDVLE MLPVYVVLLS PDYHVPFANR FFREQFGESD GRRCFDYLFS
RSEPCENCES YRVMKTGAPH HWEWTGPDGR DYDIFDFPFT EADGSPHILE VGIDITKRKR
AEEALQRLNE TLEERVIERT DELAKANAIL NAICENTPAP IYVTDRQSRL VMCNPAVLRT
LGRSHPEVLG KSKAELLGPE VGGPVVANEQ RVMETGITET FEEEIGHRIY YSTKTPLRNL
QGDVTGAIAV GTEITELKRV EAQRQKLLEQ LQQSAEEMEV QNEELQCTTE QLQEKTEELA
LLNRALQESE EHFRSLIENA SDIILLLDMQ GRITYASPSV RQIGGYEPDN LIGTDVLDLI
HPEDAPKAIE AVRTGVARPS TSLTFEVRVR DATGRWIILD VTGASLIREG SDRRFIVNAR
DVTDRKHAEE ERNRLITGLE AAHREANLYL DIITHDIRNA NNVSSIYADL MLELLEGAER
TYARKLRDSI SRSTEILMNV STIRRIHACS TGFSPVDLNA VVSEEAGNFR GASIRREIPP
LEVQADNLLS TVFMNLIGNS VKFGGPGVEI VVRAEERDGE VLVTVEDNGP GVPDDVKKKL
FHRFERGKAR GRGDGLGLFI CRTVTERYGG RIWIEDRVPG RPEEGAAFRF TLKPAKRDRD
PGS
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