| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0909 |
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| Symbol | |
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| ID | 4847888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 887660 |
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| End bp | 889213 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640115595 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001046824 |
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| Protein GI | 126178859 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0741281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC CTCGAGTACC TGGAACCTAT CTGATAGTTT TCATTGTGGC GGTCATCTCG
ATTGCCGTGA TCGCCACTGC AGCTCCTCAG TCCGGAACTT TTACGAGCGG CGAGCCGGGC
ATGCCCGGCC TCTCCGAGCC GCTTGAAATT TATCCGAACA ATCTCTCACA CGCGGATATA
TCCGGCAGTC GGATTGTCTA TAGCGATTAT AGGAACGGTA ACTGGGACAT CTTCCTGTTC
AACCACACCT CGGGCAGGGA GTACCAGCTC ACGAACGATT CCTACGACCA GATGAACCCC
ACGATATCCT GCGATCTCGT TGCCTGGTAC GACAACTCCA CCGGGGCGTG GGACCTCGTT
CTCCTCAAAC TCCACGGAGA CGATGCAGCC TATCAGGTCT GCACCGGCCC CGACCAGGGG
CGGCCGGGCT GTCCCGCGGG AGTGGTCTGT TTCCCAACCA CCACGACGAC CACCACCCCG
ACACCCGGGC CCGGGCCCGG CAACTGCTCC TGCACGGCGG ACTTCACCTG GAGCCCGCAG
AGCCCTGCCG TCAACGCTAC GGTTAACTTC ACCGGGAATG CCACGGTCGA CGGAGACTGC
AGCGTCCGGA CATGGGCCTG GAGTTTCGGC GACGGCGCAA CCGCCAGCGG CCAGGACGTC
ACCCACAATT ACACGTCGGA AGGAACCTAC CCGGTCAGGC TGAACGTGAC CCTCGACGAC
GGCACGGTAT GCAATGCGTC CGAGAACGTC ACGGTCTCGC CGCTTGCCGA TAACTGCTCC
TGTACGGCGG ACTTCACCTG GAGCCCGCAG AGCCCTGCCG TCAACGAGAC GATCGACTTC
ACCGACCAGA CCACGGTCCT GGGCGACTGC GGGATCGAGT CGTGGGCCTG GAACTTCGGC
GACGGCGCAA CCGGCGAGGG CGGAACCGCG AGCCACGCCT ATGATGCGGC AGGAACCTAC
ACGGTCGGGC TGAACGTGAC CCTCGACGAC GGTACGGCAT GCAACACCTC AAGTGACGTC
ACCATCGCAC CGCTGCCGGA GGAGAACTGC TCCTGCACGG CAAGCATCGC GACAGACCGC
GACCAGGTCG AACCGGAGCA GCCGGTTGCC TTTACCGGTT CGGCTGAGGT CGACGGGGAC
TGCTCCGTGA CCGGCTGGGC GTGGGACTTC GGCGACGGGG CGACCGGTGA AGGCGAGACC
GCGAGCCACG CCTACGCCGC GGCGGGAACC TACACGGTTA CGCTGGTCGC AACGCTCGAC
GACGGCAACA CCTGCCAGGC GACGACGGAT GTCACGGTGA CCGCTCCTCC GGAGCCCTGC
TCCTGCTCGG CAAGCATCAC GACCAGCGGG AACTCGTTCC ATGGGGAGGC CGATATCCAG
GGCGACTGCT CCGTGACCGG CTGGTCATGG GACTTCGGTG ACGGAACGAC CGGTAGCGGC
CAGGACGTCA CCCATGACTA TGCGGCGGAA GGAACCTATA CGGTCACGCT GACCGTGACG
CTCGACGACG GCAACACCTG CCAGGCGACG ACCCAGGCCT TTGTGGTCTT CTGA
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| Protein sequence | MKKPRVPGTY LIVFIVAVIS IAVIATAAPQ SGTFTSGEPG MPGLSEPLEI YPNNLSHADI
SGSRIVYSDY RNGNWDIFLF NHTSGREYQL TNDSYDQMNP TISCDLVAWY DNSTGAWDLV
LLKLHGDDAA YQVCTGPDQG RPGCPAGVVC FPTTTTTTTP TPGPGPGNCS CTADFTWSPQ
SPAVNATVNF TGNATVDGDC SVRTWAWSFG DGATASGQDV THNYTSEGTY PVRLNVTLDD
GTVCNASENV TVSPLADNCS CTADFTWSPQ SPAVNETIDF TDQTTVLGDC GIESWAWNFG
DGATGEGGTA SHAYDAAGTY TVGLNVTLDD GTACNTSSDV TIAPLPEENC SCTASIATDR
DQVEPEQPVA FTGSAEVDGD CSVTGWAWDF GDGATGEGET ASHAYAAAGT YTVTLVATLD
DGNTCQATTD VTVTAPPEPC SCSASITTSG NSFHGEADIQ GDCSVTGWSW DFGDGTTGSG
QDVTHDYAAE GTYTVTLTVT LDDGNTCQAT TQAFVVF
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