| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0901 |
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| Symbol | |
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| ID | 4846584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 878789 |
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| End bp | 881047 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640115587 |
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| Product | HAE1 family efflux transporter |
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| Protein accession | YP_001046816 |
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| Protein GI | 126178851 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR00921] The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.395656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCGG TGTTCTCGCA TCTCGGCAGA TTCATCGCCG CCCGCCCGTA TCTTGTCGCC
GGCCTGGTTG TCTCGCTTCT GGTCTTCTCG GCGTACGGCG CTTCCTCAAT CCGGATGGAG
ACGGGTATCG AGACATTCGT CGATACGGAC TCTCCCGAAG GGATACTGCT TGACGGTTAT
ACACGGGAAT TCGGGACGGA TCTGGTCTTC CTGATCGTCG AGTCGGACAA CGTGCGGGAC
CCAGCTCTTC TACGTTACGT CGACACCCTC GGTGCGGATA TCGCCGACGA ACGCTACGTG
ACCGGGACAA GGTCGCTTCC CGCGGCGATA CGATCGGTGA ACGGAGGTCG TATCCCCGGG
ACGGAGGCTG AAGTCGTCGA AACGATCTCC CGCCTCCCGC AGGAGGCCCG GGCACGTTAC
GTGCCTTTGG GGACGATGAC GCTCCTCTTC GTCACCCTCG AGCCGGACCT CTCCGACGAC
GCCAGAAGCC GGGTTCTCGA CACCCTTGAA ACCATCGTCT CGATCTCGGC CCCGCCTCCC
GGGGTGACCG TCTCAATCTC CGGCGATCCC GTATTCGACA GAGAGATGCG GGAGGCCATG
AGCCGGGAGA TGGGCATGCT GATAGCAATT GCGCTCGTCC TGATGGTCGC GGCAATCGGA
CTGCTTTTCA ACCATGTCCG CCACCGCTTC CTTCCCGTGG GGATCATCCT CTGCGGGGTG
TTCCTGACGT TCGGCACTCT CGGGTTCTTC GATCTCCGGG TGACTTCGCC GGTCATCGGA
TCGTTTCCCG TGATCATCGG TCTCGGGATC GATTACGGGG TGCAACTCCA GTCGCGACTC
CACGAAGAGA TCCGGGACAG AAGCTTGCAC GACGCAATCG TCGCCACGCT CTCTCACGCC
GGTTCCGTCC ACCTGGTCGC GATGTGCACG ACTGCTCTTG GCTTTCTGGC CCTTCTCTTC
TCTCCGGTCC CGATGATCCG GGACTTCGGG ACCGCCTGCC TGATCGGCGT CGTCTCGTGT
TTCCTGCTCG CGATCATCAT CGTTCCTGCT TTCTTTGCCA TCTTCGGCTA CGGGAAGCGG
GCAGGGGGCC GGCAGGGGCC GGCGGACGCT CCGGAAACGG GAGCACTCGC GGGCTACAGC
CGGTTCCTCG GCGGTCTGGC TGTCAGGGTG GCAAAACATC CGGTTCCTGT CATTCTCCTC
TTTGCGCTCG TCGCCGTTGC TGGCATGCAG TACGACGACA GGATCGGAAT CAACGTCGAC
CAGCAGTCCT TCGTCCCCGA GACCATGCCT GCACGGGTCA CCCTCGAAAA GGTGGAGCGG
GCGATCGGGG GGACGTCGAC CGTGCCGGTG ATGATCAGGG GGAGCGATAT CCTCGATCCG
GAGATTCTCG AATGGATCGA CGCGTTTGGA ACGTATGAGA CGGAGCGTCG GGACGAGATC
ACCGCCCATA CCGGCATCGC CACCCTTATC CGGGAGTATA ACGGCGGGTC GCTCCCCGGA
TCCGCAACCG AGATCGACGC GGTCGTCGCG CGTATCCCCG CCGAAGTCCG CGATGCATAC
CTGTCAGGCA ATTCGGAGAC GGTGATCGAG TTCGCGACGG TCGATATGGA GATGGATGCG
GTGAGCGCCC TCATCGACCG GCTCAGGAGC GACGTCGTCT GGCTCGAACC GCCGGCAGGA
CTGGATATTC AGCCCACGGG CAGATCGACG GTATACGGCG ACCTCTACGA CGGGATCGTC
CTCTCAAAAA ACCGGATGAC CGTCCTCGGC CTCCTCCTGA TCGCCATCTT CATGGTCGTC
GTATACCGCC GGTTCGACTC CCTGGCGCCG CTCCTTCCTG TCGTCATGAT CATCGGGTGG
AACAACCTGA TCATGTATGC CCTCGATATC GCGTATACCC CGCTCACGGC GTGTCTCGGT
TCGATGACCA TCGGCCTTGC GATGGACTAT ACGATCCTGA TCCTCGAGCG GTGCAGGGAG
GAGATGGGGA GAGGCCTGGA ACTCTATGAG GCCATACGCG AAGGTGTGAC GAGGATCGGG
ATCCCCATCA CCATATCCGG GCTGACGACG ATATTCGGGT TCTCGTCCAT GCTCGCGTCT
TCGTTCTCTC TCGTCTCGGG GTTCGGGCAG ACGACCGTGA TCACGATATT CTTCTCGCTC
GTCGGCGGCA TCATCGTCAT GCCCGCGGTC GTCGCCCTGG TGCTGCGCAG GGCTCCGGAG
CCTTCCGGGC ACCGGAGCGG GGCCGCGGCC GAAACATAG
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| Protein sequence | MKAVFSHLGR FIAARPYLVA GLVVSLLVFS AYGASSIRME TGIETFVDTD SPEGILLDGY
TREFGTDLVF LIVESDNVRD PALLRYVDTL GADIADERYV TGTRSLPAAI RSVNGGRIPG
TEAEVVETIS RLPQEARARY VPLGTMTLLF VTLEPDLSDD ARSRVLDTLE TIVSISAPPP
GVTVSISGDP VFDREMREAM SREMGMLIAI ALVLMVAAIG LLFNHVRHRF LPVGIILCGV
FLTFGTLGFF DLRVTSPVIG SFPVIIGLGI DYGVQLQSRL HEEIRDRSLH DAIVATLSHA
GSVHLVAMCT TALGFLALLF SPVPMIRDFG TACLIGVVSC FLLAIIIVPA FFAIFGYGKR
AGGRQGPADA PETGALAGYS RFLGGLAVRV AKHPVPVILL FALVAVAGMQ YDDRIGINVD
QQSFVPETMP ARVTLEKVER AIGGTSTVPV MIRGSDILDP EILEWIDAFG TYETERRDEI
TAHTGIATLI REYNGGSLPG SATEIDAVVA RIPAEVRDAY LSGNSETVIE FATVDMEMDA
VSALIDRLRS DVVWLEPPAG LDIQPTGRST VYGDLYDGIV LSKNRMTVLG LLLIAIFMVV
VYRRFDSLAP LLPVVMIIGW NNLIMYALDI AYTPLTACLG SMTIGLAMDY TILILERCRE
EMGRGLELYE AIREGVTRIG IPITISGLTT IFGFSSMLAS SFSLVSGFGQ TTVITIFFSL
VGGIIVMPAV VALVLRRAPE PSGHRSGAAA ET
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