| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0893 |
|---|
| Symbol | |
|---|
| ID | 4848060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 872079 |
|---|
| End bp | 873236 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640115579 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001046808 |
|---|
| Protein GI | 126178843 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.22841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGTC CATTTCACGT CATGATCATC CCCACGCTCG GTTGTCCGTC GAAATGCCAT
TACTGCTGGA GTTCCGATGA ACGGTCTCCC GTGATGAGTA TCAAGACCGT CCGGGAGATC
GCGGAATGGC TCAAGGACTA CCAGTCCAAC CAGGTCACCA TCACCTTCCA CGGGGGAGAG
CCCCTCCTTG CCGGCGCGGA CTTTTACCGG CAGGCACTTC CCACCCTCTC CGAAGGCCTC
GCCCATCTCG AACCGACGTT CGCCCTGCAG AGCAACCTCT GGCTGCTCAC CCCGGAGATG
GCCCGGATAT TCGCAGAATA CAATATTCCC ATCGGCTCCA GCATCGACGG CCCCGAGGAG
ATCAACGACA CGCAGAGAGG GAAGGGCTAC TACCAGAAGA CCATGCGGGG CTACGAGATC
GCAAAAGCAA ACGGACTTGA GGTCAGGTTC ATCTGCACGT TCACCTGCCG GTCGGTCGAG
GGTAAGGAGG AGATCTTCAA CTTCTTCCTT GAGAACGGCT TTCCCCTCAA ACTGCACCCG
GCGTTGCCGT CACTCCGGAG CGAGGATCCG AAAGAGTGGG CGCTCGAGCC GGAGGCCTAC
GGGGAACTGC TGGTCTACCT CCTCGATAAG TACCTGGAGA ACCTGAGCAA AATAGAGGTC
ATGAACATCA ACGACCTCTG CAGGTGCATC TTTACCCGGC ACGGCACCGT CTGCACGTTC
GTGGACTGCA TGGGAACCAC CCTTGCCTTC GGGCCGGACG GGAGCATATA CCCCTGTTAC
CGCTTCGTCG GGATGCCGGA GTACGCGATG GGGAACGTCT ACGACCGCCC CACAGCCGAA
GACCTCGCCC AATCAGACGC CTGGAAACTC ATGCACGCGT TCAAGGAGTT CGTCGACCGC
GAATGCGCAG GGTGTCCCCA CATCAAATAC TGCCGGGGAG GGTGCCCCTA CAACGCGATA
ACGCCGACGG ACGGCGAGAT CCAGGGCGTC GATCCTCACT GTATCGCGTA TAAGCGGATA
TTCGACGAGA TCACCAACCG GCTGAACGAA GAGATGTTCG GCTCCGGGGA TACGGAGATG
GAAGAGTTCG GCTCGCCACT CCAGAGAACG GCAAAACCGG GGATCATGGC GATCCTGCGC
GCGATGGCGA CGAAGTAG
|
|---|
| Protein sequence | MKSPFHVMII PTLGCPSKCH YCWSSDERSP VMSIKTVREI AEWLKDYQSN QVTITFHGGE
PLLAGADFYR QALPTLSEGL AHLEPTFALQ SNLWLLTPEM ARIFAEYNIP IGSSIDGPEE
INDTQRGKGY YQKTMRGYEI AKANGLEVRF ICTFTCRSVE GKEEIFNFFL ENGFPLKLHP
ALPSLRSEDP KEWALEPEAY GELLVYLLDK YLENLSKIEV MNINDLCRCI FTRHGTVCTF
VDCMGTTLAF GPDGSIYPCY RFVGMPEYAM GNVYDRPTAE DLAQSDAWKL MHAFKEFVDR
ECAGCPHIKY CRGGCPYNAI TPTDGEIQGV DPHCIAYKRI FDEITNRLNE EMFGSGDTEM
EEFGSPLQRT AKPGIMAILR AMATK
|
|---|
| |