Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0890 |
Symbol | |
ID | 4846545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 869291 |
End bp | 870385 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640115576 |
Product | ribosome small subunit-dependent GTPase A |
Protein accession | YP_001046805 |
Protein GI | 126178840 |
COG category | [R] General function prediction only |
COG ID | [COG1162] Predicted GTPases |
TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0264244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAAT CCACTCCCCG ATGCGGAGAA AAGCATCCCT ATACGCTCGA AGACCTCGGA TGGACGGACG AGCACGAGAA AGCATTCTCG AAATACGCCG GCCCGTATCT CCCCGGCCGC GTGGCCTGCC GGCAGAAGAC GGTGTGGGAT ATACTCGTCG ACGGCGGGTC CGTCACGGCC GGGATCTCCG GAGCCCTGCG GAAACTCGGC CGGTTCCCGG CGGTGGGGGA TTTCGTCGTA TTACTCCATC AACCGGAAGC CGGAACCTCG ATGATCGTCG ACATCCTCCC GCAGAAGACC CGGTTCGCGC GAGGAAGCAC GGGACGCGGC GGAAGCGATC AGGTCATCGC GGCGAATATC GACACGGTCT TCATCGTCAC GGCCGCCGGC CACGATCTCA ACGCCCGCCG GATCGAACGT TTTCTCGCGA TCGCCCATGC ATCCGGCGCC TGCCCCGTGA TCGTCATCAA CAAGTCCGAC CTCGCGGACG ATCCCGCAAC GCTCGCCGAC GAGATCGCCT CTGCCTCTTC CGGCATACCG GTGATTCCGA TCAGCGCCGT GAGCGGGGAG GGCGTCGACC GGCTCGATCC GTACCTCCCG CCGCGAACGA CGATCGCCCT CATCGGCTCG TCGGGTGTCG GCAAGTCCAC CCTGATCAAC CGGCTCATGG GTCGTCCGGT GCAGGAGACC TCGCATACCC GGGACTACGA CGATAAAGGG CGGCACACCA CGACCGTCCG CCAGCTCTTC GTCCTCGACG GCGGGGCGCT CATGATCGAC AACCCCGGTC TGCGGGAGGT CGGCATCGGT GCGGCATCCG CCGGCATCGC CGATACGTTC CCCGAGATCC TCGAACTCGC GGAGGGCTGC AGGTTCTCGG ACTGCCGGCA CGAAGAGGAG CCGGGCTGTG CGGTCCGGGC GGCCGTCGCG GACGGGACCC TCCCTGCAGC ACGGCTGGGG AGTTTTCACC GGCTCGTGCA GGAACTCGCA TTCGAACGGG ATAAAGCGGA GATCGGGCTT GTGAGACTCG AGAAGAAGCG CTGGAAAGCG ATCGGCAAAA TCCAGAGGGA TATCGGGAAG ACAAAGGGGA GGTAA
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Protein sequence | MNQSTPRCGE KHPYTLEDLG WTDEHEKAFS KYAGPYLPGR VACRQKTVWD ILVDGGSVTA GISGALRKLG RFPAVGDFVV LLHQPEAGTS MIVDILPQKT RFARGSTGRG GSDQVIAANI DTVFIVTAAG HDLNARRIER FLAIAHASGA CPVIVINKSD LADDPATLAD EIASASSGIP VIPISAVSGE GVDRLDPYLP PRTTIALIGS SGVGKSTLIN RLMGRPVQET SHTRDYDDKG RHTTTVRQLF VLDGGALMID NPGLREVGIG AASAGIADTF PEILELAEGC RFSDCRHEEE PGCAVRAAVA DGTLPAARLG SFHRLVQELA FERDKAEIGL VRLEKKRWKA IGKIQRDIGK TKGR
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