Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0884 |
Symbol | |
ID | 4848025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 861888 |
End bp | 864311 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640115570 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001046799 |
Protein GI | 126178834 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00331872 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCGC CCCCAGAAAC TCCACGGAGG AAGCCTGATC CCGCCGGGCG GGATGAGGTT CCACAGGAGA ACCCTGCAGA GACCGAACGG CTCGCCGAAG AGCGGATCAG TGAACTCCAG GTAGAGATTG ATACCCTTCG CCGGGAGAAT GAAGAACTCA GGCAGGCCGA GACCGAATGC AGGAGAGACG AAGAGGCGCT GCGCCGGGAG AAGGATAGGG TGGGTGCCAT CCTCTCCGCC CTCGATACGG GGCAGTCCCT TGTCGACCCG GATATGACGA TCGTGTGGGT CAACCAGGAG GCCCGTGACA TACTTCCCGA ACAGGAGCCC GTCGGCCAGA AGTGTTACCG CTATTTCGAA AGCCTGAACG AACCGTGCGA AGTGTGTGCA GCACGGCGCG TCTTTGCAAC GGGCGAGGTT GCAAGAGTAG AGAAGTGCGT CTCGCGCCGT GGGCGCTGGA TGAATATCGT TGCCCAGCCG GTGAAAGATG CATCCGGCCG GGTAACACAT GTTCTCGAGA GTTTCACCGA CATCACCGAG CAGAAGCAGG CGGAAGAAGC CCTGCGGGAG AGCGAGGCCA AGTACCGAAC CCTGGTGGAG ACCGCTCTCG ACATCGTCCT CATTCACGAC AGTGAGAAGA TCCTCTACAT CAATCCAACC GGGGTGAACC TTCTTGGCGC ATCCAGTCCG AACGAGATCC TCGGCAGGAA CTTCCTCGAG ATCATTCATC CCGACTTCCG CGACCGCATC CGGAAGAACG CTGCGATGGA TCTCCTGGGC GAACCTTCGC CAACCACCCA GCTCCAGCTC CTCCGGCTGG ATGGAACCCC CTTCTGGGTG GAGGGGAAAG GGGTCATGAC CTACATTGCC GGCACCCCTG TCGTCCAGGT GATCATGCGG GACATCACCG GGAGAAAGCA GATGGAGGAT GCCCTCCGGG AGAGCGAGGA GCGGTACCGT TCCCTTGTCG AGCTCATGCC GGATGCCGTG GTCGTACACC GGGACGGCAT CATCGTGTAC GTGAATCCTG CCTGCGTCCG GATTGCGGGC GCGAAGAGCC CCGAAGACCT CGTGGGCAAA CCGCTGGATC TCTTCGTCTC CCCCGAATAC CGCGAGCGTA TCGCCGGGCA TATCCGCCGG ATGGAACAGG AAGGCACGGC GACCCCATTG GTCGAACAGG AACTCAGGAC CCTCGACGAC CGGACGATTC AGGTCGACAT CACGGCGACC CCCATACTCT ACCAGGGCCA GCCTTCTATC ATGGTTGTTT TCCGGGATAT CGCCGAGCGC AAGCAGGTTG AGGCGAAACT CCGCGCCGTC ATGGAAAGAG AGCATTTGAG AGCTACCGAA CTGGATGCGA CACTTGCCTC GATCGCATCG GGCGTCATCA TCTACGATAC TACCGGGGCT ATTGTTCGGG TGAACGAAGC GGTGCGTAAG ATGATCGGCA GAACGTCGAT GTCCCTTGAT CCAGTCCGTT TCGAGGAGCG CCAGGCGGGT TTTGGGGTTC TGCGGCCGGA TGGGACGCCG CTCTCCCTCG AGGCGACCCC ATACTACCGG GCGCTGCACG GAGAGACCGT GCAGGGAGAA GAGGTGATGG TTACCCGCCT GAACCGGGAA CCGCTCTGGG TGGACACGTC AGCGGCCCCT ATCCGCGATG CCGGCGGTAC TATCGTCGGA GCCATTGCCA TCCTCACGGA TATCACCGGG CGCAAACGTG CGGAAGAAGC GCTCATACGC CATACTGAAG AACTCACCCG GCTTCACCGC GAACTGGAGG CCGCGAATCG GGAGGCGAAC CTCTACCTGG ACATCCTCAC CCACGATATC GGCAACACCG AGAACGTCTC GAACCTCTAC GCCGAACTGC TCATCGAGTC CCTGGAGGGA GAAGCAGCTG AATACATTAA GAAACTGCAG AGCAGCGTCC AGAAGAGCAT CGAGATCCTG GGCACCGTCT CAACCATCCG CCGGATTTAT CAGGCTTCAC CGGATCTCAA ACAGACCGAT CTCAACAGGG CAATCCAGGG AGCGATCGAG GGGTCCCCCA CCAGCGTCAT CTACCATAAC GGGGCCTGCC ATCTGGTCCT GGCGGACGAC CTGCTCCCCG TGGTCTTCAA CAACCTCATC GGCAATGCCG TCAAGCACGG CGGTCCTGAC GTCGAAGTCG CGGTCCGGGT TGAAGAGCAG GGCGACGAAG TGCTGGTGAC GGTCGAGGAT ACCGGTCGGG GCGTGCCGGA TGAGGACAAG GAGGCAATCT TCCACCGCTA CGAGCAGCAA AAACGCGGCG TCGGCGAAGG TCTCGGACTT TACCTCGTGC AGATCCTGGT GGAGCGCTAC GGAGGACGGG TCTGGGCCGA TGACCGGGTG CCGGGCCGCC CCGGGAAAGG AGCGGCGTTC CGGTTTACCC TGAAGAAGGC ATGA
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Protein sequence | MPAPPETPRR KPDPAGRDEV PQENPAETER LAEERISELQ VEIDTLRREN EELRQAETEC RRDEEALRRE KDRVGAILSA LDTGQSLVDP DMTIVWVNQE ARDILPEQEP VGQKCYRYFE SLNEPCEVCA ARRVFATGEV ARVEKCVSRR GRWMNIVAQP VKDASGRVTH VLESFTDITE QKQAEEALRE SEAKYRTLVE TALDIVLIHD SEKILYINPT GVNLLGASSP NEILGRNFLE IIHPDFRDRI RKNAAMDLLG EPSPTTQLQL LRLDGTPFWV EGKGVMTYIA GTPVVQVIMR DITGRKQMED ALRESEERYR SLVELMPDAV VVHRDGIIVY VNPACVRIAG AKSPEDLVGK PLDLFVSPEY RERIAGHIRR MEQEGTATPL VEQELRTLDD RTIQVDITAT PILYQGQPSI MVVFRDIAER KQVEAKLRAV MEREHLRATE LDATLASIAS GVIIYDTTGA IVRVNEAVRK MIGRTSMSLD PVRFEERQAG FGVLRPDGTP LSLEATPYYR ALHGETVQGE EVMVTRLNRE PLWVDTSAAP IRDAGGTIVG AIAILTDITG RKRAEEALIR HTEELTRLHR ELEAANREAN LYLDILTHDI GNTENVSNLY AELLIESLEG EAAEYIKKLQ SSVQKSIEIL GTVSTIRRIY QASPDLKQTD LNRAIQGAIE GSPTSVIYHN GACHLVLADD LLPVVFNNLI GNAVKHGGPD VEVAVRVEEQ GDEVLVTVED TGRGVPDEDK EAIFHRYEQQ KRGVGEGLGL YLVQILVERY GGRVWADDRV PGRPGKGAAF RFTLKKA
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