Gene Memar_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0878 
Symbol 
ID4847623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp857502 
End bp857996 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID640115564 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001046793 
Protein GI126178828 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0177181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCTCG ACCCGCTCGA CCGGGTGCTC CTCCAGCGGG TGCAGGACGA CTTTCCTCTC 
GATCCCCGGC CGTACCGGGT CATCGGCGAA GCGCTCGGGA TGCCGGAACT GGAGGTGATG
GCGCGGCTGG CCGGTCTCTC CCGCCGGGGG GTGATCAGGC ATATCGCGCC GATCCTGGAA
CCCGGAAGTC TCGGCATTCG CTCTTCCACG CTCGTCGCGA TGCGGGTGCC GGAAAAGCAG
ATGCACGAGG TCGCGGCGAT CGTGAACGGG TACGACGGCG TCTCCCACAA CTACCGCCGC
GACGGAGACT ACAACCTCTG GTTTACCGTC GCCGCTGCGG GCGAAGAGGA ACTTCACGGA
ATACTCGAGG AGATCGTGCG GCGGTCGACG ATCCCTCCCG GGGACGTCCT GAACCTTCCC
ATGGTGCGGA GGTTCAAACT CGACGTCCGG TTCCGGTTTT TAGCGGAGGA AGACGATGAT
GGACAGGGTC GATAA
 
Protein sequence
MRLDPLDRVL LQRVQDDFPL DPRPYRVIGE ALGMPELEVM ARLAGLSRRG VIRHIAPILE 
PGSLGIRSST LVAMRVPEKQ MHEVAAIVNG YDGVSHNYRR DGDYNLWFTV AAAGEEELHG
ILEEIVRRST IPPGDVLNLP MVRRFKLDVR FRFLAEEDDD GQGR