Gene Memar_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0877 
Symbol 
ID4846898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp857024 
End bp857518 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID640115563 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001046792 
Protein GI126178827 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0173236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGGG TCGATAAAGA ACTACTCATA TTGACACAGG ACGGTATCGG GTTTGAGGAG 
AGGCCGTTTC TCCGTGCGGC GAGAAGGCTT CGGATCAGCG AGGAGGAGGT CGTCGCCCGG
CTGCAGAGAC TCAGGCAGAT CGGCGTCGTC CGCCGGTTCG GGATGAGGAT CAACCCCCGG
AAAGCCGAAC TCATGGCGAA CGCCATGGTG GTCTGGAGCG TCCCCGAGAA CTGCGTCGCC
GAGGTCGGAG CGGCCATGGC GGAGAGCCCC GACGTGACTC ACTGCTACGA GCGCCGCACC
ATCCCCGGAC GCTGGGAGTA CAACCTCTAC ACCGTGCTCC ACTGCCGTGA CCGCGAGGAC
GCGCTCCGCA GGGTCGCGGC CCTCTCCCGG GCGACCGGTG CCGCCGACTA CCGGGTTCTC
TTCAGCACCG AGGAGTTCAA GCGGGAACCG AGCGGCCGGA TCGAGCCTGC GGCAGGGCCG
GGGCGTGGGC GATGA
 
Protein sequence
MDRVDKELLI LTQDGIGFEE RPFLRAARRL RISEEEVVAR LQRLRQIGVV RRFGMRINPR 
KAELMANAMV VWSVPENCVA EVGAAMAESP DVTHCYERRT IPGRWEYNLY TVLHCRDRED
ALRRVAALSR ATGAADYRVL FSTEEFKREP SGRIEPAAGP GRGR