| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0854 |
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| Symbol | |
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| ID | 4847014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 831855 |
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| End bp | 833711 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640115539 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit E |
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| Protein accession | YP_001046769 |
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| Protein GI | 126178804 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2511] Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) |
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| TIGRFAM ID | [TIGR00134] glutamyl-tRNA(Gln) amidotransferase, subunit E |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0141994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTACG AGAAACTCGG CCTCAAGGCC GGTATCGAGA TTCACCAGCA GCTCGACACC
GCCGAGAAAC TCTTCTGCCG GTGCCCGACC ACCCTCAGGG ATGTCTCCGA GCGAACCGGG
GAGTTTCACC GCTACCTCCG GGCGACGGAG AGCGAGCTCG GGGAGATCGA CCGGGCGGCG
CGCGAGGAGA TGAAACTCGT CCGGAAGTTC TGCTACTACA CCTACGACAC GGTCTGCCTG
GTGGAGCACG ACGAGGAGCC CCCGGCCCCG ATGAACCCCG AGGCGCTCGA GATCTGCCTC
ACGATAGCAA AGATGCTCGG GATGACCCCG GTCGAGCAGG TGCACACGAT GCGGAAGCTC
GTCATCGACG GCTCGAACAC CAGCGGGTTC CAGCGGACGG CGCTCGTCGC GCTCTCCGGC
GCCCTTCCCG GCGGCTGCCG GGTCGAGACG ATCTGCCTGG AGGAGGAGGC GGCGCAGCGG
GTGGAGGACG AGACCTTCTC CCTCGACCGC CTGGGGATCC CGCTCGTCGA GATCACCACC
GCCCCCTGCA TGCACACCCC CGAAGCCGTC CAGGAGGTCG CGGGGCATAT CGGGATGGTG
CTCCGTTCCA CCGGGAGGGT GAAGCGCGGG CTCGGGACGA TCCGCCAGGA CATCAACGTC
TCCATCGCCG ACGGCGCCCG GGTGGAGATC AAGGGTGTTC AGGATCTCGA TCTCATCGCC
GAGGTGGTGC GCCGCGAGGC CGGGCGGCAG ACGAATCTCC TCGCGATCCG GGATGAACTC
CGTGAGAGGG GCGCCCGGGT CGATCACACC GTCATCGACG CCACGTCCCT CTTTGCCCAA
ACGAAATCTT CGATCCTGAA GAAGGCGAAG ACCGTCCTCG CGGTCCGGCT CTGCGGGTTC
GCGGGGCTCG TCGGCCGGGA GATCCAGCCC GGCAGGCGTC TCGGGAGCGA GATGTCGGAC
TACGCGAAGA AGTGCGGCGT TGGCGGGATC TTCCACACCG ACGAGCTCCC CGCCTACGGC
GTCACGGCTG AAGAGGTGGC GCACCTGCGC GAGTTCGTCG GCGCCGCGGA GGAAGACTGC
GTCGTCATCG TTGCGGCAAC CCGGCAGCGT GCCGGGTGTG CGGCCGAGCA GGTGATGATC
CGCGCCGAGA TGGCAATCGC CGGCGTGCCC GAGGAGACCC GGAAGATGCT CGAAGAAGGG
AGCACGGCCT ACATGCGTCC GCTCCCGGGA GCCGCCCGGA TGTACCCCGA GACCGACGTC
TTCGAGGTCA CGATCGATGA CGCCCTCTGG GAGAGCATCA AGGTCCCCGA ACTCCTCACC
GACCGGACGG AACGGTTCGT CCGGGAGTTC GGGCTCGACG AAGGGCTGGC ACGGCAGGTG
GCGTTCTCCG AGCGATTGGC GCTCTTCGAG AAGGCGGTCG CCGCCGGCGT CCGCCCCACC
CTTGCTGCGC GGACGTTGCT CGGCACCTGC CGGGAGCTCG CCCGTGACGG TGTCGACGTC
GGCCGGGTGA GCGAGGAGGA GATCCTCGCC CTCCTCTTGG CCGTCGAGGC CGGCCGGGCG
GCAAAGGAGG CGATCCCCGA CCTCCTCACC GAACTCGCGC GGACCGCCGG AGACGCCGGG
GCACCCGGAG AACGGGTGGA GGCGGCCATC GGGAAGATGG GGCCCGCCGT CTCGCAGGCA
GACGTGGAGG AGATCGTGCG CCGTATCGTT GCCGAGCGCG AGGCGTTCGC CCGGGAGAAG
GGTATGGGCG CGCTCGGCCC CCTGATGGGC GTCGTCATGC AGGAGCTCCG CGGGAGCGTC
GACGGGAAGG TCATCAGCGA GACCCTCCGG CGCGAGCTCC AGCGGTTACT CTCCTGA
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| Protein sequence | MDYEKLGLKA GIEIHQQLDT AEKLFCRCPT TLRDVSERTG EFHRYLRATE SELGEIDRAA
REEMKLVRKF CYYTYDTVCL VEHDEEPPAP MNPEALEICL TIAKMLGMTP VEQVHTMRKL
VIDGSNTSGF QRTALVALSG ALPGGCRVET ICLEEEAAQR VEDETFSLDR LGIPLVEITT
APCMHTPEAV QEVAGHIGMV LRSTGRVKRG LGTIRQDINV SIADGARVEI KGVQDLDLIA
EVVRREAGRQ TNLLAIRDEL RERGARVDHT VIDATSLFAQ TKSSILKKAK TVLAVRLCGF
AGLVGREIQP GRRLGSEMSD YAKKCGVGGI FHTDELPAYG VTAEEVAHLR EFVGAAEEDC
VVIVAATRQR AGCAAEQVMI RAEMAIAGVP EETRKMLEEG STAYMRPLPG AARMYPETDV
FEVTIDDALW ESIKVPELLT DRTERFVREF GLDEGLARQV AFSERLALFE KAVAAGVRPT
LAARTLLGTC RELARDGVDV GRVSEEEILA LLLAVEAGRA AKEAIPDLLT ELARTAGDAG
APGERVEAAI GKMGPAVSQA DVEEIVRRIV AEREAFAREK GMGALGPLMG VVMQELRGSV
DGKVISETLR RELQRLLS
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