| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0851 |
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| Symbol | |
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| ID | 4846084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 827680 |
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| End bp | 828666 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640115536 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001046766 |
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| Protein GI | 126178801 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0219644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCGC TAACCGCAAT TCTTCTGGCC GTGGCCCTGG TCGCGGCGTT CACGTTTGTA
AGCGGGTGCA CCGACACCGG AACCGGCGAC GTAACGCATC TCCGGATCGG CTACCAGCCG
AGCACCCACC AGGTTTCCCA CACCACCGCG ATGGAGAAGG GATGGTGGCA GGAAGACCTC
GAACCGCTCG GCATCACGCA GGTGACCGAC TACGAGTTCG GCACCGGCGC GACCGAGATG
CAGGCGATGC TTGCCGGCGA CCTTGACATC GCCTTCGTCG GCGCCGCCCC GTTCGTCGCG
GCCGTGAGCA GCGGGCTTGA CGCCAAGATC GTTGCCGCGG TGCAGACCCA AGGCTCGGAC
CTGGTGCTCA GGACCGAGGT TCCGTACTCG ACCCCCGCCG ACCTCGTGGG CAAGAAGATC
GCCACCTTCC CGCCGGGAAC AATCCAGGAC ACCATCCTGC GGTCCTGGCT GCAGGAGAAC
GGCGTCGACC CCGCAAGCGT CGAGATCATC GCCATGGACC CCGGCGCCGC CACCACCGCC
ATCTCTGCAG GGCAGGTCGA CGGCGTCTTC CTGCCCCACC CGTCCCCGGC CATCATCGCG
GCGGAGGGCA CGGGAAGAAC CGTGGTTAAA TCGGGCGAGA TGATGAAAGA CCACGCCTGC
TGCGTCATGG TTGCAAGCGG CTCCCTGATC CGGGACCACC CTGACATCGT CGAGCAGAGC
GTGAAGACGC ACATCAGGGC GACGGAGTAC AACCTCGAAC ACCCCGACGA GGCCGCATCC
ATCTACGCGA GCAAAACCGG ACAGAACGTC GAGACCGTGA AGGCATCCTT CCGGGACTGG
GACGGCACCT GGACCGCTGA CCCGCACGTC ATCACGACGT CGGTCGTCGA GTACACCGAG
CTCCAGTACG AACTCGGCTA CATCAGCAAC CCCCTCACGG AAGACGACCT CTTCAACTTC
TCGTTCTACG ACAGGGCCCG GGCATAA
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| Protein sequence | MRSLTAILLA VALVAAFTFV SGCTDTGTGD VTHLRIGYQP STHQVSHTTA MEKGWWQEDL
EPLGITQVTD YEFGTGATEM QAMLAGDLDI AFVGAAPFVA AVSSGLDAKI VAAVQTQGSD
LVLRTEVPYS TPADLVGKKI ATFPPGTIQD TILRSWLQEN GVDPASVEII AMDPGAATTA
ISAGQVDGVF LPHPSPAIIA AEGTGRTVVK SGEMMKDHAC CVMVASGSLI RDHPDIVEQS
VKTHIRATEY NLEHPDEAAS IYASKTGQNV ETVKASFRDW DGTWTADPHV ITTSVVEYTE
LQYELGYISN PLTEDDLFNF SFYDRARA
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