| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0848 |
|---|
| Symbol | rpl10e |
|---|
| ID | 4846192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 825443 |
|---|
| End bp | 825955 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640115533 |
|---|
| Product | 50S ribosomal protein L10e |
|---|
| Protein accession | YP_001046763 |
|---|
| Protein GI | 126178798 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR00279] ribosomal protein L10.e |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.019401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTACGAA AACCAGCGAA GATGTACAGG AATCTCGCAA AGAAAGCATA TACACGCAGG
GAATACATGG GCGGCGTGCC GGGCAGCAAG ATCGTGCAGT TCGATATGGG CAACCTCACC
GAGGATTACC CGGTCGAACT CTCCATCGTC GTCGACGAGA CCTGCCAGAT ACGCCACACG
GCTCTTGAGG CCGCCCGTAT CGGTATCAAC CGGCAGCTCC AGAAGGAGGT CGGGAGGGCA
AACTTCCACC TGAAGATCCG GACGTTCCCG CACCACGTTC TCCGGGAGAA CAAGCAGGCA
ACCGGCGCAG GAGCGGACCG TGTCTCGGAA GGCATGCGTC TCGCCTTCGG CAAAGCCGTC
GGCACCGCGG CACGGGTGGA GAAGGGCCAG AAGGTCTTCT CCGTCTGGAC GAGCCCGCAG
TATGTCGACA AGGCCAAGGT TTCGCTCAAG CGCGGCATAT ACAAACTTCC GACTCCCGCA
AGAATCGTCG AAGAGCGGGC GCCGGCAGCA TAA
|
|---|
| Protein sequence | MVRKPAKMYR NLAKKAYTRR EYMGGVPGSK IVQFDMGNLT EDYPVELSIV VDETCQIRHT
ALEAARIGIN RQLQKEVGRA NFHLKIRTFP HHVLRENKQA TGAGADRVSE GMRLAFGKAV
GTAARVEKGQ KVFSVWTSPQ YVDKAKVSLK RGIYKLPTPA RIVEERAPAA
|
|---|
| |