| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0842 |
|---|
| Symbol | |
|---|
| ID | 4846645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 821269 |
|---|
| End bp | 821799 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640115527 |
|---|
| Product | pyruvate/ketoisovalerate oxidoreductase, gamma subunit |
|---|
| Protein accession | YP_001046757 |
|---|
| Protein GI | 126178792 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.102559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACACG AGATCAGGTT CTCGGGATAC GGCGGACAGG GGGTCCTCCT CTCCGCGGTC
ATTCTCGGGC GGGCGGCGGC GCTCTACGAC GACAAATACG CCGTCCAGAC CCAGGTCTAC
GGCCCGGAGG CGCGGGGCGG CGCCTCGATG GGGCAGGTGG TGATCGACGA TGAGCCGATC
CTCTACCCCG AGGTGACCGA ACCGGACATC TACGTCATCA TGTCCCAGCA GGGGTTCGAG
AAGTACGGGG TTTCAGCGCG GGAAGATGCA GTCATGCTCG TCGACTCCGA CCTGGTCCGG
TCGCGCCCGG ACTGCCGCTA CTACGAGATC CCGGCGACAT CGGAGGCGAA AAACACTCTC
GGGCGGGAGA TTGTCGCGAA TATCGTGATG ATCGGCGCCC TCGTGACCGC AACCGGGGTC
GTGAGCAGGG AGGCGATCGA GCGTGCGGTG CTCGACAGCG TCCCGAAAGG CACCGAGGAA
CTGAATCTGA AGGCGTTAAA GAGAGGATTC GAACTCGGAG AACGAGCGTG A
|
|---|
| Protein sequence | MRHEIRFSGY GGQGVLLSAV ILGRAAALYD DKYAVQTQVY GPEARGGASM GQVVIDDEPI
LYPEVTEPDI YVIMSQQGFE KYGVSAREDA VMLVDSDLVR SRPDCRYYEI PATSEAKNTL
GREIVANIVM IGALVTATGV VSREAIERAV LDSVPKGTEE LNLKALKRGF ELGERA
|
|---|
| |