Gene Memar_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0841 
Symbol 
ID4847043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp820179 
End bp821264 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content67% 
IMG OID640115526 
Productsuccinyl-CoA synthetase, beta subunit 
Protein accessionYP_001046756 
Protein GI126178791 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.174319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAC TGGAATACGA GGCAAAACGG GTCTTTGCAG AGTACGGGAT ACCGGTCCCG 
AAAGGGGTCG TTATACGGGC ACCGGAGGAG GTCGCGGCAC ACCTGCCGGA CCTCGGCGGC 
GGTGTGGTGC TGAAGGCGCA GGTGGACGTC GGCGGGCGCG GAAAGGCCGG CGGCGTCCTG 
ATGGCCGACC GCGCGACAGC GGCCGAGACC GCCCGGGAAC TCTTCTCCCG GGAGATCAAG 
GGCGTCCCGG TCGGGGAGAT CCTCGCAGAG GAGCGACTGG CGATCGAGCA CGAGTACTAC 
GTCAGCATCG CGGTCGACCG GTCGAGCAGA CAGCCGGTGG TACTCTTCGC GGACGCCGGC 
GGGGTGGAGA TCGAGAAGAT GGCACAAGAG GACGAGTCCG CCGTACGGAG AGTCGTCGTA 
TCCCCTCTCC TCCGGGACAT CCCGCCGTTT TTGATGCGGG AACTCCTCGG CGGCGCGCCG 
AAGGAACTCG CCCCCGTCAT AAACTGCCTC TACCACGTAT TCCAGGGGAA GGATGCCATG 
CTCGCGGAGA TCAACCCGCT CGTGACGACG CCGCGGGGGG TCTACGCGGC GGACGCGAAG 
CTGATCGTCG ACGACAACGC CCTCGCCCGC CAGGGGATAG CGGTCAACCG CGACCTCTCG 
GAACGCGAGC GCGAGGCCGA GAAGCACGGT TTCTCCTACG TGGAACTGGA CGGGAGCATC 
GGGGTCATCG GCAACGGCGC CGGGCTCACG ATGTCGACGC TCGACCTCAT CGAGTTTTAC 
AACGGGCGGG CGGCGAACTT CCTCGACGTC GGGGGCGGCG CCGACCAGGA GCGCGTGATG 
CACGCCGTCA GGCTCGTCGC GAGCATGCCC GGGGTGAACG TGATCGTCGT CAACCTCCTC 
GGGGGCATCA CCCGATGCGA CGAGGTGGCG AAGGGGATCA TCGCCGCCGG CGTCACGCCG 
ACGGTCATCG TCCGGATGGC CGGGACGAAC GAGGAGGAGG GGCGGCGACT GCTCGCCGGA 
TGCGGCTACC GGATGCTCGA GAGCATGGAT GCCGCCGTGA AAGCGGCGAT GGAGGTCTCA 
CTATGA
 
Protein sequence
MKLLEYEAKR VFAEYGIPVP KGVVIRAPEE VAAHLPDLGG GVVLKAQVDV GGRGKAGGVL 
MADRATAAET ARELFSREIK GVPVGEILAE ERLAIEHEYY VSIAVDRSSR QPVVLFADAG 
GVEIEKMAQE DESAVRRVVV SPLLRDIPPF LMRELLGGAP KELAPVINCL YHVFQGKDAM 
LAEINPLVTT PRGVYAADAK LIVDDNALAR QGIAVNRDLS EREREAEKHG FSYVELDGSI 
GVIGNGAGLT MSTLDLIEFY NGRAANFLDV GGGADQERVM HAVRLVASMP GVNVIVVNLL 
GGITRCDEVA KGIIAAGVTP TVIVRMAGTN EEEGRRLLAG CGYRMLESMD AAVKAAMEVS 
L