Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0798 |
Symbol | |
ID | 4847344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 779117 |
End bp | 781555 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640115482 |
Product | DNA polymerase B region |
Protein accession | YP_001046713 |
Protein GI | 126178748 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.189737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTTC CGGCAACGCT GGAGGACTTC GGGAAGATCC GTGTCGGTAT TCATCAAGTG GAGTACGGTA ACGTCGGTGC CGATACCCCG GTCGTTTATA TCTTCGGTCG GGACGCATCC GGAAAGGCCA TTCAAGTCAG GGTGAGCGGT TTTCGGCCCT ACTTCTATGC GCCTGCCGAT CTGGTGGATG GCAGATCTCT CCCGCAGGAG ATCGTCGGCG TTGAAGAGAA TACGACCTAC CGCTCTATCC AGGGCGTTCC CCTCCGGCGG CTCTACACCC GGCGTCCCGG CGATGTCCGT GCCGTCCGCG ATGTATTTTC GCACCACTAT GAGGCTGATA TCCCGTTTAC CACCCGGTTC ATGATAGACT GCGGTCTTAC CGCCGGTGTC GAATTACCTG CCGGTGCAGT TGAATCGTTC GATGGTGCCT TTGAGATCGA GTGTTGCGAA CTCGCGCCGG CCGAGATCAA GGCTCCTGCA CGCACCTGCA TCATGGATAT CGAGTGCGTG GACGAGCAGG GGTTCCCCGA GCCCGAGCGC GACCCGATCA TCTGCGTCAC CTGCTGGGAC TCGTTCGACG ACGACTACAC GACTCTCCTC TGGCAACCCG GCGAGGCGGC GGGCGATGCG CCCGATCTTT GCGTCCAAGA GCGGCACCGG GTCGTCCGGT ACCCGGACGA GATCGCGATG CTCAAGGGGC TCGTCGACTA CGTCAAAAAA CGCGACCCCG ATATCCTCTC GGGCTGGAAC TTCGTAGAGT TCGATATCCC CTACATCGTG AAACGGATGG GGGCGCTCGG CCTCAAGGCC GAGGATCTCG CTCGTATCCC GGGACAGACC GAGCGAAACG CCGTCCGGGG CCGCTCGATC TTCGATCTCC TCGGCGCTTA CCGGAAGATG CACCAGGCCC AGAAGGAGTC GTACCGGCTC GATGCGATCG CCGGGGAGGA ACTCGGGGTG ACGAAGGTCC GCTACACCGG GACGATCACC GACCTCTGGC GTACCGACCC GAAGCGGCTC GTGGAGTACA ACTACCGCGA CGTCGAGCTC TGCGTCGGGA TCGATCAAAA GAACAACATC ATCGAGTTCT ACCGGGAGAT CGCCCGGTAC GTCGGGTGCC CGCTCGACCG GACGCTGAAC TCGTCGAACG TCATCGACAT CTTCGTTCTC CGGAAGGCGT CGGGCACGTT CGTTCTCCCC TCAAAAGGGC TCGCTGCAGG TGACGAGTTC GAGGGGGCGA CCGTCTTTGA GCCCGCGACC GGTCTAAGGG AGAACGTGGT GGTTCTCGAC CTGAAATCGC TCTACCCTAT GGCGATGATG ACGATCAACG CCTCGCCCGA GACGAAGAAC CCGGACGGCG AACTGCGGGC CCCGAACGGC ATCCGGTTCT CCCGGGAACC GGACGGGCTG ACACGGAGCA TCATCGCCGA GCTCCTGGAG GAGCGGGACG AGCGCAAGCG GCTCCGAAAC CTTTACCCCT TCGGGTCGCC GGAGTACGTC CTTTACGACC TCCAGCAGAA CGTCCTGAAG GTGATCATGA ACTCCTACTA TGGGGTCTCG GGCTACACCC GGTTCAGGCT CTACGACCGC GAGATCGGGT CGGCCGTCAC TTCGGTCGGC CGGGCGATCA TCAGGCACAC CCGGGATATC ATCACCAATC TCGGCTATAC TGTGCTCTAC GGCGACACTG ACTCCTGCAT GATCGAGGTT CCGCCGGGCG ATCTCGAGGC GACCATTGCG CGGGCGAGGG AGATCGAGGC GAAGCTGAAC GCGAGCTACG GCGACTTCGC GAAGACCGAG CTGAACGCCG ATACGCATTA CTTCTCCATC AAGTTCGAGA AGGTCTACCG CCGTTTCTTC CAGGCAGGCA AGAAGAAGCG CTACGCGGGG CACCTGGTCT GGAAGGAGGG CAAGGACGTC GACGAGGTGG ACGTCGTCGG CTTCGAGATC CGGCGCAGCG ACTCTCCGCA GATCACGCGG GAGGTGCAGC GTGCCGTCAT CGAGATGATC CTTCGCGGGG ACGCGTTCAG CGACGTGCAG GCGTATCTCC GCGACGTCAT CCGAAAGTAC CGCCGGGGGG AGTACTCCCT CGACGAGGCC GGCATTCCGG GCGGTATCGG GAAGAGCCTG GATAGTTACG AGAACGACGA CGCCCACATC CGGGGCGCCA AGTACTCGAA CATGCATCTC GGGACCGACT TCAAGCGGGG CAGCAAACCC AAACGCGTCT ACATCAAGGC CGTCACGGCG AAGTACCCGC GAACGGACGT GGTCTGCTTC GAGTATGCCG ACCAGGTGCC GCCGGAGTTC GTCGTCGACT GGGAGACGAT GCTTGAAAAG ACGCTCAAAG GCCCTCTCTC GCGGATCATC GAGCCGCTCG GGTGGGACTG GCACGACGTC GACCCCTCGC GGACGACGCT CTTTGATTTC GGGATGTGA
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Protein sequence | MSVPATLEDF GKIRVGIHQV EYGNVGADTP VVYIFGRDAS GKAIQVRVSG FRPYFYAPAD LVDGRSLPQE IVGVEENTTY RSIQGVPLRR LYTRRPGDVR AVRDVFSHHY EADIPFTTRF MIDCGLTAGV ELPAGAVESF DGAFEIECCE LAPAEIKAPA RTCIMDIECV DEQGFPEPER DPIICVTCWD SFDDDYTTLL WQPGEAAGDA PDLCVQERHR VVRYPDEIAM LKGLVDYVKK RDPDILSGWN FVEFDIPYIV KRMGALGLKA EDLARIPGQT ERNAVRGRSI FDLLGAYRKM HQAQKESYRL DAIAGEELGV TKVRYTGTIT DLWRTDPKRL VEYNYRDVEL CVGIDQKNNI IEFYREIARY VGCPLDRTLN SSNVIDIFVL RKASGTFVLP SKGLAAGDEF EGATVFEPAT GLRENVVVLD LKSLYPMAMM TINASPETKN PDGELRAPNG IRFSREPDGL TRSIIAELLE ERDERKRLRN LYPFGSPEYV LYDLQQNVLK VIMNSYYGVS GYTRFRLYDR EIGSAVTSVG RAIIRHTRDI ITNLGYTVLY GDTDSCMIEV PPGDLEATIA RAREIEAKLN ASYGDFAKTE LNADTHYFSI KFEKVYRRFF QAGKKKRYAG HLVWKEGKDV DEVDVVGFEI RRSDSPQITR EVQRAVIEMI LRGDAFSDVQ AYLRDVIRKY RRGEYSLDEA GIPGGIGKSL DSYENDDAHI RGAKYSNMHL GTDFKRGSKP KRVYIKAVTA KYPRTDVVCF EYADQVPPEF VVDWETMLEK TLKGPLSRII EPLGWDWHDV DPSRTTLFDF GM
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