Gene Memar_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0798 
Symbol 
ID4847344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp779117 
End bp781555 
Gene Length2439 bp 
Protein Length812 aa 
Translation table11 
GC content62% 
IMG OID640115482 
ProductDNA polymerase B region 
Protein accessionYP_001046713 
Protein GI126178748 
COG category[L] Replication, recombination and repair 
COG ID[COG0417] DNA polymerase elongation subunit (family B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.189737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTC CGGCAACGCT GGAGGACTTC GGGAAGATCC GTGTCGGTAT TCATCAAGTG 
GAGTACGGTA ACGTCGGTGC CGATACCCCG GTCGTTTATA TCTTCGGTCG GGACGCATCC
GGAAAGGCCA TTCAAGTCAG GGTGAGCGGT TTTCGGCCCT ACTTCTATGC GCCTGCCGAT
CTGGTGGATG GCAGATCTCT CCCGCAGGAG ATCGTCGGCG TTGAAGAGAA TACGACCTAC
CGCTCTATCC AGGGCGTTCC CCTCCGGCGG CTCTACACCC GGCGTCCCGG CGATGTCCGT
GCCGTCCGCG ATGTATTTTC GCACCACTAT GAGGCTGATA TCCCGTTTAC CACCCGGTTC
ATGATAGACT GCGGTCTTAC CGCCGGTGTC GAATTACCTG CCGGTGCAGT TGAATCGTTC
GATGGTGCCT TTGAGATCGA GTGTTGCGAA CTCGCGCCGG CCGAGATCAA GGCTCCTGCA
CGCACCTGCA TCATGGATAT CGAGTGCGTG GACGAGCAGG GGTTCCCCGA GCCCGAGCGC
GACCCGATCA TCTGCGTCAC CTGCTGGGAC TCGTTCGACG ACGACTACAC GACTCTCCTC
TGGCAACCCG GCGAGGCGGC GGGCGATGCG CCCGATCTTT GCGTCCAAGA GCGGCACCGG
GTCGTCCGGT ACCCGGACGA GATCGCGATG CTCAAGGGGC TCGTCGACTA CGTCAAAAAA
CGCGACCCCG ATATCCTCTC GGGCTGGAAC TTCGTAGAGT TCGATATCCC CTACATCGTG
AAACGGATGG GGGCGCTCGG CCTCAAGGCC GAGGATCTCG CTCGTATCCC GGGACAGACC
GAGCGAAACG CCGTCCGGGG CCGCTCGATC TTCGATCTCC TCGGCGCTTA CCGGAAGATG
CACCAGGCCC AGAAGGAGTC GTACCGGCTC GATGCGATCG CCGGGGAGGA ACTCGGGGTG
ACGAAGGTCC GCTACACCGG GACGATCACC GACCTCTGGC GTACCGACCC GAAGCGGCTC
GTGGAGTACA ACTACCGCGA CGTCGAGCTC TGCGTCGGGA TCGATCAAAA GAACAACATC
ATCGAGTTCT ACCGGGAGAT CGCCCGGTAC GTCGGGTGCC CGCTCGACCG GACGCTGAAC
TCGTCGAACG TCATCGACAT CTTCGTTCTC CGGAAGGCGT CGGGCACGTT CGTTCTCCCC
TCAAAAGGGC TCGCTGCAGG TGACGAGTTC GAGGGGGCGA CCGTCTTTGA GCCCGCGACC
GGTCTAAGGG AGAACGTGGT GGTTCTCGAC CTGAAATCGC TCTACCCTAT GGCGATGATG
ACGATCAACG CCTCGCCCGA GACGAAGAAC CCGGACGGCG AACTGCGGGC CCCGAACGGC
ATCCGGTTCT CCCGGGAACC GGACGGGCTG ACACGGAGCA TCATCGCCGA GCTCCTGGAG
GAGCGGGACG AGCGCAAGCG GCTCCGAAAC CTTTACCCCT TCGGGTCGCC GGAGTACGTC
CTTTACGACC TCCAGCAGAA CGTCCTGAAG GTGATCATGA ACTCCTACTA TGGGGTCTCG
GGCTACACCC GGTTCAGGCT CTACGACCGC GAGATCGGGT CGGCCGTCAC TTCGGTCGGC
CGGGCGATCA TCAGGCACAC CCGGGATATC ATCACCAATC TCGGCTATAC TGTGCTCTAC
GGCGACACTG ACTCCTGCAT GATCGAGGTT CCGCCGGGCG ATCTCGAGGC GACCATTGCG
CGGGCGAGGG AGATCGAGGC GAAGCTGAAC GCGAGCTACG GCGACTTCGC GAAGACCGAG
CTGAACGCCG ATACGCATTA CTTCTCCATC AAGTTCGAGA AGGTCTACCG CCGTTTCTTC
CAGGCAGGCA AGAAGAAGCG CTACGCGGGG CACCTGGTCT GGAAGGAGGG CAAGGACGTC
GACGAGGTGG ACGTCGTCGG CTTCGAGATC CGGCGCAGCG ACTCTCCGCA GATCACGCGG
GAGGTGCAGC GTGCCGTCAT CGAGATGATC CTTCGCGGGG ACGCGTTCAG CGACGTGCAG
GCGTATCTCC GCGACGTCAT CCGAAAGTAC CGCCGGGGGG AGTACTCCCT CGACGAGGCC
GGCATTCCGG GCGGTATCGG GAAGAGCCTG GATAGTTACG AGAACGACGA CGCCCACATC
CGGGGCGCCA AGTACTCGAA CATGCATCTC GGGACCGACT TCAAGCGGGG CAGCAAACCC
AAACGCGTCT ACATCAAGGC CGTCACGGCG AAGTACCCGC GAACGGACGT GGTCTGCTTC
GAGTATGCCG ACCAGGTGCC GCCGGAGTTC GTCGTCGACT GGGAGACGAT GCTTGAAAAG
ACGCTCAAAG GCCCTCTCTC GCGGATCATC GAGCCGCTCG GGTGGGACTG GCACGACGTC
GACCCCTCGC GGACGACGCT CTTTGATTTC GGGATGTGA
 
Protein sequence
MSVPATLEDF GKIRVGIHQV EYGNVGADTP VVYIFGRDAS GKAIQVRVSG FRPYFYAPAD 
LVDGRSLPQE IVGVEENTTY RSIQGVPLRR LYTRRPGDVR AVRDVFSHHY EADIPFTTRF
MIDCGLTAGV ELPAGAVESF DGAFEIECCE LAPAEIKAPA RTCIMDIECV DEQGFPEPER
DPIICVTCWD SFDDDYTTLL WQPGEAAGDA PDLCVQERHR VVRYPDEIAM LKGLVDYVKK
RDPDILSGWN FVEFDIPYIV KRMGALGLKA EDLARIPGQT ERNAVRGRSI FDLLGAYRKM
HQAQKESYRL DAIAGEELGV TKVRYTGTIT DLWRTDPKRL VEYNYRDVEL CVGIDQKNNI
IEFYREIARY VGCPLDRTLN SSNVIDIFVL RKASGTFVLP SKGLAAGDEF EGATVFEPAT
GLRENVVVLD LKSLYPMAMM TINASPETKN PDGELRAPNG IRFSREPDGL TRSIIAELLE
ERDERKRLRN LYPFGSPEYV LYDLQQNVLK VIMNSYYGVS GYTRFRLYDR EIGSAVTSVG
RAIIRHTRDI ITNLGYTVLY GDTDSCMIEV PPGDLEATIA RAREIEAKLN ASYGDFAKTE
LNADTHYFSI KFEKVYRRFF QAGKKKRYAG HLVWKEGKDV DEVDVVGFEI RRSDSPQITR
EVQRAVIEMI LRGDAFSDVQ AYLRDVIRKY RRGEYSLDEA GIPGGIGKSL DSYENDDAHI
RGAKYSNMHL GTDFKRGSKP KRVYIKAVTA KYPRTDVVCF EYADQVPPEF VVDWETMLEK
TLKGPLSRII EPLGWDWHDV DPSRTTLFDF GM