Gene Memar_0789 details

Gene Information

• Locus tag: Memar_0789
• ID: 4846818
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 770824
• End bp: 772833
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640115473
• Product: helicase c2
• Protein accession: YP_001046704
• Protein GI: 126178739
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.222881
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAGCC TCGACGACTG GTTCCCGTAC CGGGAGTACC GGCCCCATCA GCGGGAGATG 
CTTGAAGCGG CCGCCTCCAT CGCACGCGAC GGCGGCATCG CCATGATCGA TGCGCCGACC 
GGGAGCGGCA AGTCGAGCGT GGTCTCCGCG CTCCTCGCGG AGAGCCGGGG ACGAAAAGTG 
CTCGTCGCCG TCCGGACCAT CAGCCAGCTC GCCACGTTCA TGCGCGAGCT CGAGCTCATC 
CGGAAGAAGC GCGGCAACCT CAAGTTCGCC TACCTCATCG GCAAGTCAAG CATGTGCCCG 
CTCGGCGGCG AGGGCGATAT CTACCGGCGG TGCGAGGGCG TCAAGTCTTT CTCGACGGCG 
CTGATGCGGG AGCGGGCGCA GAAGGGCTCG CTCGTCCCGG CGAACGATCG CCAGATAAAG 
CAGCAGATCC GCAAGATGGA CCCGGAGCAC CCGCTCATCT GCCCTTATTT CATCCACGGC 
AAATCGTTCG TGGAGCCCGA GGACGGAGGA CTGAAGATGA TCCCGTCGGC GGCCCTGCGT 
GTCCGGGCCG AGCGGGTGAG CACCGAGCTG ATCTGGCCTG ACCAGCTCGC CGGGTTCTGT 
GGCGATATCT GCCCTTATGA TACGATGATG CATGCTGCCC GGGACGCCGA CGTGGTGCTC 
GTGAACTTCT ACCACCTCTT CGACGACATG ATCCGGGAAC AGCTCTACCA GTCGCTTGGG 
ATCGAGGGGC ACGACGCCCT GCTGCTCATC GACGAAGCGC ACAACTGCGG AGACGTCGTC 
CAGAGCATCG AGAGCGTGAC GATCGAGGAG CGCGACATCG TGCAGGCCGG TCACGAACTC 
TCCGGACGGC GGCGATCGCC GCAGGCGGAC GCCATAGTCC AGATCCTGCC GCAGATCACC 
CGGTTCATGG AGGCGCTCAA GGGCTCTTAT GAGACGGAGG ACTTCTTCGA GCCGCCGGTC 
TTTCAGAAGA TGATCCTGTC CGGCACGCTC TACCGGAGCG TGGAGGAGAT CGTGGACGAC 
CTCCTCAAGA TCAGCGAGGG GATTCGCGAG AAGAATATGC AGGCGGGCGA GTTCCGGGAG 
AGCGCAATCG AGCGGCTGAC CGAGTTCTTC TACCGGATCT TCCGCTCCGC CGCCGACCCG 
GCATACCTCA CGGTCTACCG CAAAGAAGAG GACGGGGCTG TGGCGCTCGA GGTCCGAAAC 
ATCGACCCGA GCACCAAACT CCAGGACATC GCCCGGGCGC ACGCCTGTTG CGTTTTGATC 
TCGGGGACGC TCTCCCCCAT CGAGAGTTAC CGCCGCTACT ACTTCGGCGA CCTTCCCGTC 
ACGGCGATGT CGCTCCCGAA CTCCTTCCCC CCACAGAACC GCCGCATCTT CTGTGCAAAC 
GACATCACCA CCGCCTACTC GATGCGCCGG GACAGAGAGA ACCTCGCACG GACCGAGGAC 
TACATCACCA CGTTTGCCCG CCTCCCCGGG AACCTCGCGG TCTATTTTCC CTCCTACGAC 
CTCCTGAACA CCTTTGCGGA GCGGTGCGCA CCCCGCATCA GAAAGAAGCA GATCTACATC 
GAGTCCAAGG ATGCCACAGC CTCGGCCGCG ATGCTCCGGG AGTTCATGGC CCTCCCGGGA 
ACCGGCCGCT CGGGCATCCT CTTTGCGGTC TGCGGCGGCA AGTGGAGCGA GGGCCTGGAC 
TACCGCGGCG AGATGCTCTC GGGGGCGCTC GTCATCGGCC TCCCGCTCGC GCCGTTCAAC 
CGTGTCAGGA GGATGGTGAT CGACTACTTC CGGATGAAGT TCGGGGAGGA GGGGGAGTTC 
ATCAGTTACA CCCTCCCGGC GGTCAACCGC GCCCTGCAGG CGCTCGGCCG GGTGCTCCGG 
ACGCCCGATG ATCGGGGTAT GCTCATCCTC GGGGACAGAA GGTTCCTGGA GCGCCGGGTT 
CATGCGGGGC TGCCGCCGTG GATGCAGGAG GAGATGACGG CATGCACCGT CGAAGCGTTC 
CGAAAGGAGG CCGAGAGATG GCGATCCTGA 

 

Protein sequence

MDSLDDWFPY REYRPHQREM LEAAASIARD GGIAMIDAPT GSGKSSVVSA LLAESRGRKV 
LVAVRTISQL ATFMRELELI RKKRGNLKFA YLIGKSSMCP LGGEGDIYRR CEGVKSFSTA 
LMRERAQKGS LVPANDRQIK QQIRKMDPEH PLICPYFIHG KSFVEPEDGG LKMIPSAALR 
VRAERVSTEL IWPDQLAGFC GDICPYDTMM HAARDADVVL VNFYHLFDDM IREQLYQSLG 
IEGHDALLLI DEAHNCGDVV QSIESVTIEE RDIVQAGHEL SGRRRSPQAD AIVQILPQIT 
RFMEALKGSY ETEDFFEPPV FQKMILSGTL YRSVEEIVDD LLKISEGIRE KNMQAGEFRE 
SAIERLTEFF YRIFRSAADP AYLTVYRKEE DGAVALEVRN IDPSTKLQDI ARAHACCVLI 
SGTLSPIESY RRYYFGDLPV TAMSLPNSFP PQNRRIFCAN DITTAYSMRR DRENLARTED 
YITTFARLPG NLAVYFPSYD LLNTFAERCA PRIRKKQIYI ESKDATASAA MLREFMALPG 
TGRSGILFAV CGGKWSEGLD YRGEMLSGAL VIGLPLAPFN RVRRMVIDYF RMKFGEEGEF 
ISYTLPAVNR ALQALGRVLR TPDDRGMLIL GDRRFLERRV HAGLPPWMQE EMTACTVEAF 
RKEAERWRS