Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0779 |
Symbol | |
ID | 4846045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 761031 |
End bp | 761681 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640115463 |
Product | hypothetical protein |
Protein accession | YP_001046694 |
Protein GI | 126178729 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00509054 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGAAT CAGCACTTGC CCGGTTCAGA AGCGAGACCC GGCACTTCTA TATCGTTGCC ATCGCGAACA TCGTCTTTGC CGCACTTGTG ATGGCGTTCG GCATCAGCGT GATCGTCGGA GAGGCGGTCT CCATGTACGA GACGTTCTCC ACCGCGCAGT ATGTGATCTA TTCCCCGGTC GTCCTGTTCG TCGCGCTTGT TGCCGCCCTT ACGGGCTTTC GCTGGCTTCT CACCAGCGTC CGGGTCTTCG AAGGAATCGA GGTGATCAAG GACGACCTCG ATGGGATGGG AGGCGAGGTC CCGGACGAGG CTCTCACCCG CCTCATCGTA AGCATGCTCT CCCACTACCG CGACAACCGC GCAACCGTCC GCACCATGAT CCTGGTCTGC ACGCTCGGCG GCGTCTGCTC GTTTCTTCTC GGGCTCGCTG TCAGCCTGGA GCACCTCTCC GTCTCAGCGG ACGGTATCTC CTTCACCATC AACAACTACC TGGTCATCAC GTTCATGCTC CTCACGCTCG GGATCGCCCT CGTCAGCCTT GCCTCCTCGT ACTACTTCTC CCGGTTCGCA AACGTCTGGG ACGAGCGGCT CGACGAGATC GAGGAGTCCG AGGCTCTCCT GAAAGAAACG CTGGAGACGG ATCGGCGATG A
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Protein sequence | MHESALARFR SETRHFYIVA IANIVFAALV MAFGISVIVG EAVSMYETFS TAQYVIYSPV VLFVALVAAL TGFRWLLTSV RVFEGIEVIK DDLDGMGGEV PDEALTRLIV SMLSHYRDNR ATVRTMILVC TLGGVCSFLL GLAVSLEHLS VSADGISFTI NNYLVITFML LTLGIALVSL ASSYYFSRFA NVWDERLDEI EESEALLKET LETDRR
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