Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0758 |
Symbol | |
ID | 4848007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 736434 |
End bp | 737348 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640115441 |
Product | phage integrase family protein |
Protein accession | YP_001046673 |
Protein GI | 126178708 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000222973 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAACG CCTGTTTCTC GGAATGGCTG GATCGCTTCA GCAGTTACCT CCGGATGCGG AACTACTCGC CCCGGACCAT CGAAAAATAC CTGCAGACCA TCCGGCGTTT CGCCCGATAC GCCTGGTTAC GACAGAACTC GGACGGGGTC TCGTTCGATG GGGCTGCGTT CGAGAACGCT CCGCTGGATG CCGACGTCAA CGTCTCTTCG GCTCTCGTCA CCGATTTCTT CTCTTACTTA TCGGAACAGC AGGACTACAA GCCCAAGACC CTCCACCGGA TGATCTCGAC GCTCTCTTCG TTTTACAAGT ATCTCTACGT GCAGGGCGCC GTGGTCGCCG ACCCGATGCT CGGGGTGGAG CGGCCCCGGA TCAAGAATCA GGAACTGAAA TATCTCAAAC ACAGCCAGGT TCTCCGCCTG ATCAACACCA TTGAGAGTGA GCGCGACCGG CTGATCGTCC GCCTTATTTA CGCCACCGGT GTCCGTGTTT CGGAGCTTTG CGCGATATGC GTCGAGGACA TCGATTTCGA GGAACAGACG ATACGGGTGA AGGGTAAAGG CGATAAGATA CGGACGGTTT TCATCGACGA GGAGACTCTC GAAGAGATTA ACCGGTTCAT CGGCAACACA ATCGAGGGGC CGCTCTTTTC AGGTCAGCAG GGCAACCACC TCTCCCCGCG AACCGTCCAG CATCTCTTCA AGCAATACGC TCCTTCCGGG ATTACACCGC ATAAAATCCG GCATTCCTAT GCGAGTGAAC TCTATCGCCG CTCGAAGAAT CTCCGCGTCG TGCAGGAGAA CCTGGGGCAC TCCTCCATCA AGACGACCGA GATCTACCTG CACACCGACA TCGACGAGCG CAAACGCGTC TATCAGCAGT ATTTCCCGCT CTCGAACGGA AAAAAAGAGG AATGA
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Protein sequence | MDNACFSEWL DRFSSYLRMR NYSPRTIEKY LQTIRRFARY AWLRQNSDGV SFDGAAFENA PLDADVNVSS ALVTDFFSYL SEQQDYKPKT LHRMISTLSS FYKYLYVQGA VVADPMLGVE RPRIKNQELK YLKHSQVLRL INTIESERDR LIVRLIYATG VRVSELCAIC VEDIDFEEQT IRVKGKGDKI RTVFIDEETL EEINRFIGNT IEGPLFSGQQ GNHLSPRTVQ HLFKQYAPSG ITPHKIRHSY ASELYRRSKN LRVVQENLGH SSIKTTEIYL HTDIDERKRV YQQYFPLSNG KKEE
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