| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0738 |
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| Symbol | |
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| ID | 4847822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 715082 |
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| End bp | 716278 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640115421 |
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| Product | TraB family protein |
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| Protein accession | YP_001046653 |
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| Protein GI | 126178688 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.070919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGA TCCGCCTTGT CGGAACGGCG CACGTCTCGC GGAAGAGCGT TGAAGAAGTC
CGATCCGCCA TCGAGGAGTT CCAGCCCGAT ATCGTCGGCG TCGAGCTCGA CCGGGGCAGG
TTCGTATCGC TCAGAGAGGA GGCGGCCGAA CCCTCGGTAG GGGAGATCCT GAAAGGCGGG
AACTTCGGCC AGCTCCTCGT TCAGTGGGTG CTCACCTACA TCCAGCAGCG GATCGGCGCA
GAAACCGGCG TGAAGCCCGG TGCCGAGATG CTCGCCGCCG TCGAGGAGGC CGAAGCGCAC
CAGAAGCCCG TGGCGCTCAT CGACCGGGAT ATCCGGATCA CACTTGCCCG GTTCTGGGGC
AGGATGGGCA TCTGGGAGAA GATCAAACTC ATCGGAGCCC TGATCTATTC GCTCGTGAGT
GTCGAGGGGC AGAAGATCGA CGTCGACGAG TTCACTGACC AGGACGTCGT GAGCGCTGCC
ATGGAGGAGT TCAGGAAGTT CTCTCCCCGG GGCGCCCAGG CCCTGATCGA CGAGCGGGAC
GCCTATCTGG CTCACCAGAT CCTGATGCTC GGGGGCCGGT ACGAGCGGGT GCTCGCCGTC
GTCGGTGCCG GGCATATCCG GGGGGTGCAG CGATACCTGG ACGCACCGGA GACGCTGCCG
CCGCTCCCGG CCCTGACCGC CGGGGTGAAG ACTCTCCCGT GGGCGAAGAT CATCGGGGTG
GGCGTCACCA TTCTCTTCCT CCTCCTGATC GCCGCGATAG CCTTCTCGGG CGTTGGGATA
GATGTCCTAC TGACGGCTCT CCTCTACTGG GTTCTGATCA ACGGTGTCCT GAGCGCCGCG
TTCACCCTGG TTGCCGGCGG GCATCCTCTC TCGGCCGTCA CGGCGTTTGC GGTTTCCTGG
CTGACATCGC TCAATCCCCT GCTTGCGGCG GGCTGGTTTG CCGCCATCGT CGAGGCGAAG
ATCCGGAAGC CCGCCGTCGG TGAGTTCCGG CAGATCATCG AGGCGGAGAC TCTGGCGGAG
ATGCGGCGGA TCCCGCTCTT TCGGGTGGTG CTGGTTGCAG CCCTCGCGAG CGTCGGGAGT
ACGCTCGGGA CGGTCCTCTA CTTCCTCTTC ATATTTCCGA TCCTCGGGAT CGACCCGACC
GTGGTCATCG CCGACGGCTT CTCGAACATG GTGGAGATGA TACGGGGACT CTTCTAG
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| Protein sequence | MTEIRLVGTA HVSRKSVEEV RSAIEEFQPD IVGVELDRGR FVSLREEAAE PSVGEILKGG
NFGQLLVQWV LTYIQQRIGA ETGVKPGAEM LAAVEEAEAH QKPVALIDRD IRITLARFWG
RMGIWEKIKL IGALIYSLVS VEGQKIDVDE FTDQDVVSAA MEEFRKFSPR GAQALIDERD
AYLAHQILML GGRYERVLAV VGAGHIRGVQ RYLDAPETLP PLPALTAGVK TLPWAKIIGV
GVTILFLLLI AAIAFSGVGI DVLLTALLYW VLINGVLSAA FTLVAGGHPL SAVTAFAVSW
LTSLNPLLAA GWFAAIVEAK IRKPAVGEFR QIIEAETLAE MRRIPLFRVV LVAALASVGS
TLGTVLYFLF IFPILGIDPT VVIADGFSNM VEMIRGLF
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