| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0736 |
|---|
| Symbol | |
|---|
| ID | 4846221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 714005 |
|---|
| End bp | 714559 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640115419 |
|---|
| Product | GMP synthase subunit A |
|---|
| Protein accession | YP_001046651 |
|---|
| Protein GI | 126178686 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
|---|
| TIGRFAM ID | [TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.683361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCCAC TCTATGTGGT CAATAATCAC GGGCAGTTCA ACCACCTGAT CCTCCGGACG
CTCCGTGACA TGGATATCGA GGCCACGATG ATCTCGAATG AGACGCCGCC GGCCGAGGTC
GCCCGGGGCT GCCGGGGCAT CGTCCTCGGC GGCGGCCCGA CCCTTGAACG TGCCGGCGTC
GCCTCTGCGT ACCTTGACCT CGGTCTTCCC GTCCTCGGCA TCTGCCTTGG GCTGCACATC
ATGGCGACGG CCCGCGGGGG TGCGATCCGC CGGGGTGCGA GCGGCGGGTT CGGTGCGGTC
GAGGTTGAGA TCTTCGAACA GAACCCTCTC CTCCGTGGCT ACCCGGACCG GATGCAGGTA
TGGGCGTCGC ACGCGGACGA GGTCTCGGTT GTGCCGGAAG GATTTGTCCG GCTTGCAGGA
TCATCCATCT GCGGCGTGGA GGCGATGGCA TCTCCCGATG AACACCTCTA CGGTATCCAG
TGGCACCCGG AGGTCAGTCA TACCGTCAAC GGACGGCTTC TCTTTGAGAA TTTTGACGGG
ATATGCTCGG AGTAG
|
|---|
| Protein sequence | MLPLYVVNNH GQFNHLILRT LRDMDIEATM ISNETPPAEV ARGCRGIVLG GGPTLERAGV
ASAYLDLGLP VLGICLGLHI MATARGGAIR RGASGGFGAV EVEIFEQNPL LRGYPDRMQV
WASHADEVSV VPEGFVRLAG SSICGVEAMA SPDEHLYGIQ WHPEVSHTVN GRLLFENFDG
ICSE
|
|---|
| |