| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0729 |
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| Symbol | rps10p |
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| ID | 4848383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 708326 |
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| End bp | 708634 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640115412 |
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| Product | 30S ribosomal protein S10P |
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| Protein accession | YP_001046644 |
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| Protein GI | 126178679 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01046] ribosomal protein S10(archaeal)/S20(eukaryotic) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000150109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGAAAG CCAGAATACG TCTTTCCGGA ACCGACTTCG AAAAAATCGA GATGGTCTGC
GACCGGATCA AAGAGATAGC AGAGCGTACC GGCGTCAATC TGGCAGGTCC GATCCCGCTG
CCCACGAAGA AACTCGTGGT CCCCACCAGG AAGAGCCCTG ACGGCGAAGG TACCGCAACC
TGGGATCGCT GGCAGATGCG AGTGCACAAG AGACTCATCG ACATTGATGC CGACGAGCGT
GCGCTACGCC AGCTGATGCG TATTCAGGTT CCAAAAGACA TCGGCATTGA GATTGTGCTG
GAGAGTTGA
|
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| Protein sequence | MQKARIRLSG TDFEKIEMVC DRIKEIAERT GVNLAGPIPL PTKKLVVPTR KSPDGEGTAT
WDRWQMRVHK RLIDIDADER ALRQLMRIQV PKDIGIEIVL ES
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